RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 STAG3L4Q8TBR4 150 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 EXT2Q93063 718 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 LINGO1Q96FE5 620 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PDLIM5Q96HC4 596 aaKnown RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 NECAB3Q96P71 396 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-207ENST00000558763 NUF2Q9BZD4 464 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 RASSF4Q9H2L5 321 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF385DQ9H6B1 395 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PCDH12Q9NPG4 1184 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 DKK3Q9UBP4 350 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 IL36AQ9UHA7 158 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 SARDHQ9UL12 918 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 HCN2Q9UL51 889 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 PLA2G4CQ9UP65 541 aa12.8□□□□□ -0.36
SMAD3-207ENST00000558763 CCDC189A1A4V9 331 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 UPK3BL1B0FP48 263 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 UPK3BL2E5RIL1 263 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 BTN3A1O00481 513 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 PPP6CO00743 305 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 HNRNPCL1O60812 293 aaKnown RBP12.79□□□□□ -0.36
SMAD3-207ENST00000558763 EGFP01133 1207 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 RPS17P08708 135 aaKnown RBP12.79□□□□□ -0.36
SMAD3-207ENST00000558763 TPBGLP0DKB5 382 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 GM2AP17900 193 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 CHRM3P20309 590 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 EPHA3P29320 983 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 METAP1P53582 386 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 MLF2Q15773 248 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-207ENST00000558763 PFKFB4Q16877 469 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 LSM12Q3MHD2 195 aaKnown RBP12.79□□□□□ -0.36
SMAD3-207ENST00000558763 FNDC3BQ53EP0 1204 aaKnown RBP12.79□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF805Q5CZA5 627 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 CFAP157Q5JU67 520 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 EGFLAMQ63HQ2 1017 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 RINLQ6ZS11 566 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 HSD11B1LQ7Z5J1 315 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 PBXIP1Q96AQ6 731 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 NSUN5Q96P11 429 aaKnown RBP12.79□□□□□ -0.36
SMAD3-207ENST00000558763 TRMOQ9BU70 441 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 C1QTNF3Q9BXJ4 246 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 CLPBQ9H078 707 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 CD320Q9NPF0 282 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 TCF7L2Q9NQB0 619 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 TAS2R1Q9NYW7 299 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 VTI1BQ9UEU0 232 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 CRLS1Q9UJA2 301 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 GNPTGQ9UJJ9 305 aa12.79□□□□□ -0.36
SMAD3-207ENST00000558763 GOLGA8QA0A0J9YX86 632 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 A0A1B0GTL3 188 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 GOLGA8OA6NCC3 632 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 E5RI56 91 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 E9PBE3 544 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 GOLGA8NF8WBI6 632 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SLCO1B7G3V0H7 640 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 K7EQS6 105 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SDHDO14521 159 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 KLHL41O60662 606 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SMIM24O75264 130 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ENO1P06733 434 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 CD1EP15812 388 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF30P17039 623 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 TSPAN8P19075 237 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 VIPR1P32241 457 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 MMP12P39900 470 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 NNMTP40261 264 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 IL2P60568 153 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ST8SIA6P61647 398 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 POLR2LP62875 67 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF234Q14588 700 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 TBCCQ15814 346 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 TMEM196Q5HYL7 178 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 GPRC6AQ5T6X5 926 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 LYPLAL1Q5VWZ2 237 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 PARS2Q7L3T8 475 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 GJD3Q8N144 294 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 UCMAQ8WVF2 138 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 FAM3CQ92520 227 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ERLEC1Q96DZ1 483 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 LRIG1Q96JA1 1093 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ACOX2Q99424 681 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 CADM1Q9BY67 442 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 NFKBIL1Q9UBC1 381 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 MUTYHQ9UIF7 546 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 FBXL21Q9UKT6 434 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 RNF112Q9ULX5 631 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 NDRG2Q9UN36 371 aaKnown RBP12.78□□□□□ -0.36
SMAD3-207ENST00000558763 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 SHISA7A6NL88 538 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 C16orf96A6NNT2 1141 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 A8MUI8 341 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 CDK14O94921 469 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 HLA-EP13747 358 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 TIE1P35590 1138 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 CPA2P48052 419 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 INHBCP55103 352 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 CDH13P55290 713 aa12.78□□□□□ -0.36
SMAD3-207ENST00000558763 DCDC1P59894 354 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms