RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 UGT2B4P06133 528 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 HTR1BP28222 390 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 FAM91A1Q658Y4 838 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 TSSK3Q96PN8 268 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 NODALQ96S42 347 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 MOV10Q9HCE1 1003 aaKnown RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 SMPD3Q9NY59 655 aaPredicted RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 I3L521 148 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 ABLIM1O14639 778 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 RPS9P46781 194 aaKnown RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 ZNF460Q14592 562 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 SMARCD3Q6STE5 483 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 EPS8L1Q8TE68 723 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 DNASE1L2Q92874 299 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 EBNA1BP2Q99848 306 aaKnown RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 ERVK-5Q9HDB9 667 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 REREQ9P2R6 1566 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 SERPINB7O75635 380 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 GIMD1P0DJR0 217 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 CSTF1Q05048 431 aaKnown RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 NAE1Q13564 534 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 NT5DC1Q5TFE4 455 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 ZNF410Q86VK4 478 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 CFAP206Q8IYR0 622 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 LENG9Q96B70 501 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 TCF25Q9BQ70 676 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 CCSER2Q9H7U1 834 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 PSME2Q9UL46 239 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 FCF1Q9Y324 198 aaKnown RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 OR2AT4A6NND4 320 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 M0R036 132 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 SLC30A4O14863 429 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 POLR2JP52435 117 aaKnown RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 TAS2R40P59535 323 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ZNF155Q12901 538 aaPredicted RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 CAPSQ13938 189 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ALG11Q2TAA5 492 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 FAIM2Q9BWQ8 316 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 TMEM168Q9H0V1 697 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 COQ10BQ9H8M1 238 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 TREM1Q9NP99 234 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ZNF490Q9ULM2 529 aaPredicted RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 NR2E3Q9Y5X4 410 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 MAU2Q9Y6X3 613 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 FABP3P05413 133 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 RB1P06400 928 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 CCNCP24863 283 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 GCNT1Q02742 428 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PLEKHG4Q58EX7 1191 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 LZTR1Q8N653 840 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ZFP28Q8NHY6 868 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PPCDCQ96CD2 204 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 TEFMQ96QE5 360 aaKnown RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 ACO2Q99798 780 aaKnown RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PORCNQ9H237 461 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PRDM12Q9H4Q4 367 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 SAMD4AQ9UPU9 718 aaKnown RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 CNTNAP1P78357 1384 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 TNFRSF11BO00300 401 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PAGE1O75459 146 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 APOL3O95236 402 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 SAGP10523 405 aaPredicted RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 MASP1P48740 699 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ZBTB6Q15916 424 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PTF1AQ7RTS3 328 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 DENND6BQ8NEG7 585 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 OR5M3Q8NGP4 307 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 SIGLEC16A6NMB1 481 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 FPGTO14772 594 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ORC5O43913 435 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PRKD3O94806 890 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 GRK5P34947 590 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 RNF144AP50876 292 aaPredicted RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 ZNF132P52740 706 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 UBXN2BQ14CS0 331 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PPM1JQ5JR12 505 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 LRRC19Q9H756 370 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 SEMA3GQ9NS98 782 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PXDNLA1KZ92 1463 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 COL6A1P12109 1028 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 IGFALSP35858 605 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ASB18Q6ZVZ8 466 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 ATCAYQ86WG3 371 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 PDPRQ8NCN5 879 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 HOPXQ9BPY8 73 aaPredicted RBP13.84□□□□□ -0.19
SPG11-210ENST00000558319 CKLFQ9UBR5 152 aa13.84□□□□□ -0.19
SPG11-210ENST00000558319 CD163L1Q9NR16 1453 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 C5orf51A6NDU8 294 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 A8MV72 311 aaPredicted RBP13.83□□□□□ -0.19
SPG11-210ENST00000558319 FLT3LGP49771 235 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 NRG3P56975 720 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 BNIP1Q12981 228 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 HSPB3Q12988 150 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 ECM1Q16610 540 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 TUBA3EQ6PEY2 450 aa13.83□□□□□ -0.19
SPG11-210ENST00000558319 PIWIL4Q7Z3Z4 852 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms