RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 CCNYL3P0C7X3 344 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 MAGEA1P43355 309 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 HADHBP55084 474 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 ITGA9Q13797 1035 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 SEPT6Q14141 434 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 PPP2R5EQ16537 467 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 TAZQ16635 292 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 PLA2G4EQ3MJ16 856 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 ATP13A5Q4VNC0 1218 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 CRTC2Q53ET0 693 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 SIRPB2Q5JXA9 342 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 B4GALNT4Q76KP1 1039 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 ZC3H18Q86VM9 953 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 RASGRP3Q8IV61 690 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 CCDC50Q8IVM0 306 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 BEND7Q8N7W2 519 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 APOBEC4Q8WW27 367 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 ZNF514Q96K75 400 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 FCRL5Q96RD9 977 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 FSD1LQ9BXM9 530 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 ZNF768Q9H5H4 540 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 IL26Q9NPH9 171 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 SCHIP1Q9P0W5 487 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 HYOU1Q9Y4L1 999 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 SPO11Q9Y5K1 396 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 KLHL33A6NCF5 533 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 AURKAO14965 403 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 NKX2-8O15522 239 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 NFKB1P19838 968 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 HLA-DPA1P20036 260 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 TCN2P20062 427 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 SPAM1P38567 509 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 DRG2P55039 364 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 WASHC5Q12768 1159 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 MPP3Q13368 585 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 SPA17Q15506 151 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 CCDC181Q5TID7 509 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 CACHD1Q5VU97 1274 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 C6orf15Q6UXA7 325 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 TIPARPQ7Z3E1 657 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 ZNF547Q8IVP9 402 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 KATNAL2Q8IYT4 538 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 SLC25A41Q8N5S1 370 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 RBM41Q96IZ5 413 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 OR6C1Q96RD1 312 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 RAB33BQ9H082 229 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 APMAPQ9HDC9 416 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 EPHA6Q9UF33 1036 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 SLC30A1Q9Y6M5 507 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 RPS6KL1Q9Y6S9 549 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 MYO18BQ8IUG5 2567 aa13.37□□□□□ -0.27
SNRPA1-204ENST00000558020 GLYATL1P3A0A0U1RQE8 302 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 LOC101059948A0A1B0GTJ6 334 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 OR52A4PA6NMU1 304 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 C2orf81A6NN90 581 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 STX7O15400 261 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 POP7O75817 140 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 ANXA9O76027 345 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 MT-ND3P03897 115 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 PRKAR1AP10644 381 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 STAT5AP42229 794 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 CAPZBP47756 277 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 SEPHS1P49903 392 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 GFERP55789 205 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 CDC20Q12834 499 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 XRCC4Q13426 336 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 GPR18Q14330 331 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 SLC1A5Q15758 541 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 LONRF2Q1L5Z9 754 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 IRGCQ6NXR0 463 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 KDELC1Q6UW63 502 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 GLT6D1Q7Z4J2 308 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 PRSS42Q7Z5A4 293 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 BPHLQ86WA6 291 aaPredicted RBP13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 UNC5BQ8IZJ1 945 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 IPMKQ8NFU5 416 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 BLOC1S5Q8TDH9 187 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 STARD8Q92502 1023 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 LRRC45Q96CN5 670 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 STAMBPL1Q96FJ0 436 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 CALR3Q96L12 384 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 PDE7BQ9NP56 450 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 SIDT1Q9NXL6 827 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 OGFRQ9NZT2 677 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 IL17CQ9P0M4 197 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 TRIM10Q9UDY6 481 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 RSPH14Q9UHP6 348 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 KCND3Q9UK17 655 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 PADI1Q9ULC6 663 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 KCTD3Q9Y597 815 aa13.36□□□□□ -0.27
SNRPA1-204ENST00000558020 PRR19A6NJB7 356 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 PYCARD-AS1I3L0S3 204 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 TERTO14746 1132 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 STK10O94804 968 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 DLGAP3O95886 979 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 PYGMP11217 842 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 BRAFP15056 766 aa13.35□□□□□ -0.27
SNRPA1-204ENST00000558020 PECAM1P16284 738 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms