RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TMX2-CTNND1H3BSU7 103 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 KIR2DS3K7RE56 304 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-211ENST00000557623 GPR39O43194 453 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SNX2O60749 519 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 CSO75390 466 aaKnown RBP12.3□□□□□ -0.44
SLIRP-211ENST00000557623 RPLP0P05388 317 aaKnown RBP12.3□□□□□ -0.44
SLIRP-211ENST00000557623 PROS1P07225 676 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 IDSP22304 550 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 GRIA1P42261 906 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 FASLGP48023 281 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 VPS41P49754 854 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 CLDN6P56747 220 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 KIR2DS5Q14953 304 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 NR1D2Q14995 579 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 TRIP13Q15645 432 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-211ENST00000557623 PLA2G4EQ3MJ16 856 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 PCID2Q5JVF3 399 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 TSTD2Q5T7W7 516 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 LRRC8BQ6P9F7 803 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 IYDQ6PHW0 289 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 TMEM220Q6QAJ8 160 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SPRED1Q7Z699 444 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SLC9B2Q86UD5 537 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 AMZ2Q86W34 360 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 ZNF547Q8IVP9 402 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 NXPE1Q8N323 547 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SFRP1Q8N474 314 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SH3KBP1Q96B97 665 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 RUNDC3BQ96NL0 473 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 GFM1Q96RP9 751 aaKnown RBP12.3□□□□□ -0.44
SLIRP-211ENST00000557623 COPS8Q99627 209 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 NRSN2Q9GZP1 204 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 IL22Q9GZX6 179 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SYNDIG1Q9H7V2 258 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 ZDHHC3Q9NYG2 299 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SMARCAL1Q9NZC9 954 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 TBC1D29Q9UFV1 150 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 SLC23A2Q9UGH3 650 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 TCAF1Q9Y4C2 921 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 KNTC1P50748 2209 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 TRBV5-4A0A0C4DH59 114 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 A6NCN8 305 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 CCL22O00626 93 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 POP7O75817 140 aaKnown RBP12.29□□□□□ -0.44
SLIRP-211ENST00000557623 ACRV1P26436 265 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 CA5AP35218 305 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 MAGEA6P43360 314 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 CTSCP53634 463 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 SESN2P58004 480 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-211ENST00000557623 CCL7P80098 99 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 B4GALNT1Q00973 533 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 DMPKQ09013 629 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 CLPPQ16740 277 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-211ENST00000557623 ISXQ2M1V0 245 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 BCL7AQ4VC05 210 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 CCDC38Q502W7 563 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 LYPLAL1Q5VWZ2 237 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 ARMC3Q5W041 872 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 AFTPHQ6ULP2 937 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 TAS2R42Q7RTR8 314 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 C11orf96Q7Z7L8 435 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 MARCH9Q86YJ5 346 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 Q8N9G6 341 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-211ENST00000557623 SLC37A2Q8TED4 501 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 NXPE2Q96DL1 559 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 TMEM74Q96NL1 305 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 TTC1Q99614 292 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 SLC38A3Q99624 504 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-211ENST00000557623 FAM96AQ9H5X1 160 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 SARS2Q9NP81 518 aaKnown RBP12.29□□□□□ -0.44
SLIRP-211ENST00000557623 WASH6PQ9NQA3 447 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
SLIRP-211ENST00000557623 TRBV23OR9-2A0A075B6M9 112 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 A0A1W2PQM1 296 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 CCDC78A2IDD5 438 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 PPM1DO15297 605 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 EML2O95834 649 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 ATP1B2P14415 290 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 XRCC1P18887 633 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 ALDH4A1P30038 563 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 PPARGP37231 505 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-211ENST00000557623 HALP42357 657 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 PRAMEP78395 509 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 GPLD1P80108 840 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 HHEXQ03014 270 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 ACVR1Q04771 509 aa12.28□□□□□ -0.44
SLIRP-211ENST00000557623 ITIH4Q14624 930 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms