RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 WASHC5Q12768 1159 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 INSCQ1MX18 579 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 IYDQ6PHW0 289 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 CCDC81Q6ZN84 652 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 GLT6D1Q7Z4J2 308 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF438Q7Z4V0 828 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 C17orf82Q86X59 251 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 CDKL3Q8IVW4 592 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF567Q8N184 647 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 SFRP1Q8N474 314 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 SLC25A41Q8N5S1 370 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ZSCAN1Q8NBB4 408 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 AGBL5Q8NDL9 886 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 GPR26Q8NDV2 337 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 OR4D9Q8NGE8 314 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 BLOC1S5Q8TDH9 187 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 UBE2Q2Q8WVN8 375 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TADA1Q96BN2 335 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PRR11Q96HE9 360 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 SEC16BQ96JE7 1060 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 MRGPRX2Q96LB1 330 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 QKIQ96PU8 341 aaKnown RBP eCLIP7.24□□□□□ -1.258e-7■■■■■ 54.9
SCFD1-222ENST00000556768 ASPSCR1Q9BZE9 553 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 EPB41L1Q9H4G0 881 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 NEUROD4Q9HD90 331 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 BPIFA1Q9NP55 256 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 SARS2Q9NP81 518 aaKnown RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 KLC4Q9NSK0 619 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 ATXN10Q9UBB4 475 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 CNOT6Q9ULM6 557 aaKnown RBP7.24□□□□□ -1.25
SCFD1-222ENST00000556768 TFR2Q9UP52 801 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 KCNK6Q9Y257 313 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 DUSP10Q9Y6W6 482 aa7.24□□□□□ -1.25
SCFD1-222ENST00000556768 PDZK1P1A8MUH7 402 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 PPM1DO15297 605 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 STX7O15400 261 aaKnown RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 KCNN4O15554 427 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 KCNJ13O60928 360 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 DNAJC6O75061 913 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 RBP3P10745 1247 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 F3P13726 295 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 ZNF8P17098 575 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 BPIP17213 487 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 IDSP22304 550 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 CD82P27701 267 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 RBL1P28749 1068 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 CD1CP29017 333 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 SLC5A2P31639 672 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 PDX1P52945 283 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 MAPK10P53779 464 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 EIF3EP60228 445 aaKnown RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 NFATC2Q13469 925 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 SQSTM1Q13501 440 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 ITGA9Q13797 1035 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 NR1D2Q14995 579 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 SLC1A5Q15758 541 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 TAF1BQ53T94 588 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 SIRPB2Q5JXA9 342 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 LDLRAP1Q5SW96 308 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 ARHGAP40Q5TG30 622 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 TMEM71Q6P5X7 295 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 CLEC14AQ86T13 490 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 LRRTM4Q86VH4 590 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 PLXDC1Q8IUK5 500 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 TRAPPC5Q8IUR0 188 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 BEND7Q8N7W2 519 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 LSM14AQ8ND56 463 aaKnown RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 ACTL9Q8TC94 416 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 SLC37A2Q8TED4 501 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 PATE1Q8WXA2 126 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 KRT35Q92764 455 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 ALS2CR12Q96Q35 445 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 VPS35Q96QK1 796 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 CCNL2Q96S94 520 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 B3GNT4Q9C0J1 378 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 PRORYQ9H606 182 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 NFKBIL1Q9UBC1 381 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 TBC1D29Q9UFV1 150 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 PLEKHM1Q9Y4G2 1056 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 OAS3Q9Y6K5 1087 aaKnown RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 DOCK9Q9BZ29 2069 aa7.23□□□□□ -1.25
SCFD1-222ENST00000556768 NYNRINQ9P2P1 1898 aaKnown RBP7.23□□□□□ -1.25
SCFD1-222ENST00000556768 IGHV1OR21-1A0A087WYE8 117 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 GLYATL1P3A0A0U1RQE8 302 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 C5orf60A6NFR6 353 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 AGRPO00253 132 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 NRDCO43847 1150 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CRTAMO95727 393 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 VIPP01282 170 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 RALBP11234 206 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 HGFP14210 728 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 HSD3B2P26439 372 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CD68P34810 354 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-222ENST00000556768 PTPN7P35236 360 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 SPAM1P38567 509 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 HALP42357 657 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 MARCKSL1P49006 195 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 CLCNKAP51800 687 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 LIMK2P53671 638 aa7.22□□□□□ -1.25
SCFD1-222ENST00000556768 OTUD4Q01804 1114 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms