RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 EIF3MQ7L2H7 374 aaKnown RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 RNF180Q86T96 592 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 MZB1Q8WU39 189 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAR1Q8WVX9 515 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 SLC25A13Q9UJS0 675 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CNOT11Q9UKZ1 510 aaKnown RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 OGDHLQ9ULD0 1010 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 H0YJX3 145 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 EIF2S1P05198 315 aaKnown RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 EDN1P05305 212 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 TSPAN19P0C672 248 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 IMPDH2P12268 514 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 SMPD1P17405 629 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CLCN2P51788 898 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 YBEYP58557 167 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 TUSC3Q13454 348 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 DET1Q7L5Y6 550 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CENPSQ8N2Z9 138 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 PIK3C3Q8NEB9 887 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 BIRC7Q96CA5 298 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 SMAD5Q99717 465 aaKnown RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 TMEM9Q9P0T7 183 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 MARF1Q9Y4F3 1742 aaKnown RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 LAMB1P07942 1786 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 A0A1W2PP18 115 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 BMP10O95393 424 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 MYL12AP19105 171 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CXCR3P49682 368 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 TPTEP56180 551 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 RAB39AQ14964 217 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 LIX1Q8N485 282 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CDK15Q96Q40 435 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 TRPC4Q9UBN4 977 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 PHF24Q9UPV7 400 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 A0A0J9YVX5 310 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 FOXD2O60548 495 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SERPINA1P01009 418 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 S100A1P23297 94 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 AQP1P29972 269 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 MAGEA6P43360 314 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 UFM1P61960 85 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SLC10A7Q0GE19 358 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZNF678Q5SXM1 525 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 PPP4R4Q6NUP7 873 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 CHST15Q7LFX5 561 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 APOLD1Q96LR9 279 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 RMI1Q9H9A7 625 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 CCM2LQ9NUG4 571 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 GDAP2Q9NXN4 497 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 RAI2Q9Y5P3 530 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ITGB4P16144 1822 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 DOCK2Q92608 1830 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 MAST2Q6P0Q8 1798 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ECM29Q5VYK3 1845 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 CENPXA8MT69 81 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 CCNKO75909 580 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 GLDCP23378 1020 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SLC2A7Q6PXP3 512 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ANKRD46Q86W74 232 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 TP53INP2Q8IXH6 220 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ARRDC4Q8NCT1 418 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 MRPS31Q92665 395 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZNF778Q96MU6 729 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 EBF1Q9UH73 591 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 WBP11Q9Y2W2 641 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 LOC110117498-PIK3R3F6TDL0 507 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ECI2O75521 394 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 FABP3P05413 133 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 CPOXP36551 454 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 PPP1R8Q12972 351 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 KLHL35Q6PF15 583 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZNF773Q6PK81 442 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 RASAL3Q86YV0 1011 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZC3H7AQ8IWR0 971 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 NAT16Q8N8M0 369 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 OR5K1Q8NHB7 308 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 PAWRQ96IZ0 340 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 CAMKK2Q96RR4 588 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 HDHD2Q9H0R4 259 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ADAM30Q9UKF2 790 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SAGE2PA6NJ88 616 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 DCLK1O15075 740 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 AIREO43918 545 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SLC25A14O95258 325 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 IL4RP24394 825 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SERPINA4P29622 427 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 TAF10Q12962 218 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SMYD5Q6GMV2 418 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZDHHC21Q8IVQ6 265 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 BIRC8Q96P09 236 aa14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SOX17Q9H6I2 414 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 KAT8Q9H7Z6 458 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-207ENST00000556399 SOCS2O14508 198 aa14.86□□□□□ -0.03
ARHGEF40-207ENST00000556399 CLPXO76031 633 aa14.86□□□□□ -0.03
ARHGEF40-207ENST00000556399 PDE9AO76083 593 aa14.86□□□□□ -0.03
ARHGEF40-207ENST00000556399 IL7RP16871 459 aa14.86□□□□□ -0.03
ARHGEF40-207ENST00000556399 PAX3P23760 479 aa14.86□□□□□ -0.03
ARHGEF40-207ENST00000556399 FMO3P31513 532 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms