RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 MMP28Q9H239 520 aa5.54□□□□□ -1.52
LINC00871-202ENST00000556071 RAD21L1Q9H4I0 556 aa5.54□□□□□ -1.52
LINC00871-202ENST00000556071 DNAJC18Q9H819 358 aa5.54□□□□□ -1.52
LINC00871-202ENST00000556071 TRMT1Q9NXH9 659 aaKnown RBP5.54□□□□□ -1.52
LINC00871-202ENST00000556071 TBC1D29Q9UFV1 150 aa5.54□□□□□ -1.52
LINC00871-202ENST00000556071 POLG2Q9UHN1 485 aa5.54□□□□□ -1.52
LINC00871-202ENST00000556071 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 J3QR06 171 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 P2RY10O00398 339 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 DVL1O14640 695 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 ZBTB43O43298 467 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 TMCC2O75069 709 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 SELLP14151 372 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 GM2AP17900 193 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 NR2F2P24468 414 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 DVL1P1P54792 670 aaPredicted RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 PPP2R2BQ00005 443 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 LMOD3Q0VAK6 560 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 RAB41Q5JT25 222 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 TPRG1Q6ZUI0 275 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 PLEKHM3Q6ZWE6 761 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 ZNF534Q76KX8 674 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 NFE4Q86UQ8 179 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 GBGT1Q8N5D6 347 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 METTL27Q8N6F8 245 aaPredicted RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 C1orf52Q8N6N3 182 aaKnown RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 PPP4R1Q8TF05 950 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 OXNAD1Q96HP4 312 aaPredicted RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 DDOQ99489 341 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 TRMT61BQ9BVS5 477 aaKnown RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 RCC2Q9P258 522 aaKnown RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 ZNF112Q9UJU3 913 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 VPS28Q9UK41 221 aa5.53□□□□□ -1.52
LINC00871-202ENST00000556071 FAF1Q9UNN5 650 aaPredicted RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.53□□□□□ -1.52
LINC00871-202ENST00000556071 ANKRD18BA2A2Z9 1011 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 PLK4O00444 970 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 GJB3O75712 270 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 TUBBP07437 444 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 MFAP4P55083 255 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 MRPS5P82675 430 aaKnown RBP5.52□□□□□ -1.53
LINC00871-202ENST00000556071 DLG2Q15700 870 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 MZT2BQ6NZ67 158 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 USP43Q70EL4 1123 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 GALNT13Q8IUC8 556 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 EPHX4Q8IUS5 362 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 SAT2Q96F10 170 aaPredicted RBP5.52□□□□□ -1.53
LINC00871-202ENST00000556071 ALG14Q96F25 216 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 NEUROD6Q96NK8 337 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 HGH1Q9BTY7 390 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 MAK16Q9BXY0 300 aaKnown RBP5.52□□□□□ -1.53
LINC00871-202ENST00000556071 TRPC7Q9HCX4 862 aa5.52□□□□□ -1.53
LINC00871-202ENST00000556071 A0A0B4J293 547 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 A0A1W2PQ09 198 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 FAM172BPA6NC97 362 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 ANKRD66B4E2M5 251 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 SYNGR3O43761 229 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 FGF17O60258 216 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 MITFO75030 526 aaPredicted RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 GH2P01242 217 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 MMP9P14780 707 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 NR1D1P20393 614 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 SLC15A1P46059 708 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 HOXA1P49639 335 aaPredicted RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 SUOXP51687 545 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 TERF1P54274 439 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 ACVR2BQ13705 512 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 KCNC3Q14003 757 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 ZDHHC20Q5W0Z9 365 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 C19orf48Q6RUI8 117 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 PLXDC2Q6UX71 529 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 Q6ZTC4 211 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 PIWIL4Q7Z3Z4 852 aaKnown RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 DCUN1D3Q8IWE4 304 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 C17orf53Q8N3J3 647 aaPredicted RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 C1orf131Q8NDD1 294 aaKnown RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 UHRF2Q96PU4 802 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 SEMA6AQ9H2E6 1030 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 HRH4Q9H3N8 390 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 SUCLA2Q9P2R7 463 aaPredicted RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 ADD3Q9UEY8 706 aaKnown RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 GPR34Q9UPC5 381 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 EXO1Q9UQ84 846 aaKnown RBP5.51□□□□□ -1.53
LINC00871-202ENST00000556071 KIF26BQ2KJY2 2108 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 KAT6BQ8WYB5 2073 aa5.51□□□□□ -1.53
LINC00871-202ENST00000556071 RSF1Q96T23 1441 aaPredicted RBP5.5□□□□□ -1.53
LINC00871-202ENST00000556071 IGLV5-45A0A087WSX0 123 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 B4DLN1 442 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 BUD23O43709 281 aaKnown RBP5.5□□□□□ -1.53
LINC00871-202ENST00000556071 IGKV3-20P01619 116 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 IGHV4-39P01824 125 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 KRT19P08727 400 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 CSF2RAP15509 400 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 ZNF23P17027 643 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 MCCP23508 829 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 GCH1P30793 250 aa5.5□□□□□ -1.53
LINC00871-202ENST00000556071 MRPL12P52815 198 aaKnown RBP5.5□□□□□ -1.53
LINC00871-202ENST00000556071 CLNS1AP54105 237 aaKnown RBP5.5□□□□□ -1.53
LINC00871-202ENST00000556071 GAGE5Q13069 117 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms