RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SLC14A2Q15849 920 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 INSCQ1MX18 579 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FAM83HQ6ZRV2 1179 aaPredicted RBP14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FAM92BQ6ZTR7 304 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TTC30BQ8N4P2 665 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FAM26EQ8N5C1 309 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CT55Q8WUE5 264 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CPLX3Q8WVH0 158 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SLC41A2Q96JW4 573 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 AGAP3Q96P47 875 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 VPS35Q96QK1 796 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SLC25A51Q9H1U9 297 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 POLHQ9Y253 713 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FER1L5A0AVI2 2057 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PDZK1P1A8MUH7 402 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 ZNF487B1APH4 448 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CREG1O75629 220 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CDK14O94921 469 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RECKO95980 971 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 KRT7P08729 469 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 AMD1P17707 334 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 UQCRFS1P47985 274 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CTSCP53634 463 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CDK18Q07002 472 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 DNASE1L3Q13609 305 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 NFKBIBQ15653 356 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 PCSK7Q16549 785 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CACHD1Q5VU97 1274 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 HIST2H2BCQ6DN03 193 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 PWWP2BQ6NUJ5 590 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 NT5DC3Q86UY8 548 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 APLFQ8IW19 511 aaPredicted RBP14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 MAP7D3Q8IWC1 876 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CBX8Q9HC52 389 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 IL26Q9NPH9 171 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 LHX9Q9NQ69 397 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CTTNBP2NLQ9P2B4 639 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 TRIM10Q9UDY6 481 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 HEY1Q9Y5J3 304 aa14.08□□□□□ -0.16
CHMP4BP1-201ENST00000556017 BLACEA4D250 179 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CDC14CA4D256 554 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RASSF9O75901 435 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 MTA2O94776 668 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 NDST3O95803 873 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 SERPINC1P01008 464 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 SLC4A1P02730 911 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RPS18P62269 152 aaKnown RBP14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 DMPKQ09013 629 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 TMEM115Q12893 351 aaPredicted RBP14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 SEPT6Q14141 434 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 ESPL1Q14674 2120 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 FAM199XQ6PEV8 388 aaPredicted RBP14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 KDELC1Q6UW63 502 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 ZNF517Q6ZMY9 492 aaPredicted RBP14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 ASB18Q6ZVZ8 466 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 LUZP1Q86V48 1076 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 VSIG1Q86XK7 387 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RASGEF1AQ8N9B8 481 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 SLC38A9Q8NBW4 561 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 STAMBPL1Q96FJ0 436 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 GPR63Q9BZJ6 419 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 GLOD4Q9HC38 313 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 BPIFA1Q9NP55 256 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 MLXIPLQ9NP71 852 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 UBP1Q9NZI7 540 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 LNPEPQ9UIQ6 1025 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 PADI1Q9ULC6 663 aa14.07□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CELSR2Q9HCU4 2923 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CRYBG3Q68DQ2 2970 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 LOC285095A0A1B0GVY8 99 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 MKRN2OSH3BPM6 223 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 KATNA1O75449 491 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RFPL1O75677 317 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 H2AFZP0C0S5 128 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RNF224P0DH78 156 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 IDSP22304 550 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 FECHP22830 423 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 PTPN3P26045 913 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CASP14P31944 242 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 HMGCLP35914 325 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 AP1B1Q10567 949 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 WASHC5Q12768 1159 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 SEMA5AQ13591 1074 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 IL10RAQ13651 578 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 SLC18A3Q16572 532 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 TEX44Q53QW1 395 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 CPZQ66K79 652 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 IRGCQ6NXR0 463 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 H2AFVQ71UI9 128 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 PPP1R3BQ86XI6 285 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 TRIM48Q8IWZ4 208 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RBM12BQ8IXT5 1001 aaKnown RBP14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 TEKT5Q96M29 485 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 MAP3K3Q99759 626 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 TWSG1Q9GZX9 223 aa14.06□□□□□ -0.16
CHMP4BP1-201ENST00000556017 RAD18Q9NS91 495 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms