RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ADAMTS20P59510 1910 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 IGHV5-10-1A0A0J9YXX1 117 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 PDZK1P1A8MUH7 402 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 PRSS56P0CW18 603 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 RBMS1P29558 406 aaKnown RBP20.16■□□□□ 0.82
VTI1B-205ENST00000555543 FDFT1P37268 417 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 GRIA1P42261 906 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 CCDC173Q0VFZ6 552 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 EIF3IQ13347 325 aaKnown RBP20.16■□□□□ 0.82
VTI1B-205ENST00000555543 SEMA5AQ13591 1074 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 C16orf72Q14CZ0 275 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 COL28A1Q2UY09 1125 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 DRICH1Q6PGQ1 229 aaPredicted RBP20.16■□□□□ 0.82
VTI1B-205ENST00000555543 TMEM220Q6QAJ8 160 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 FAM83HQ6ZRV2 1179 aaPredicted RBP20.16■□□□□ 0.82
VTI1B-205ENST00000555543 FBXO39Q8N4B4 442 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 BEND7Q8N7W2 519 aaPredicted RBP20.16■□□□□ 0.82
VTI1B-205ENST00000555543 CCDC89Q8N998 374 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 RCBTB1Q8NDN9 531 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 CRELD1Q96HD1 420 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 CCDC74BQ96LY2 380 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 C19orf43Q9BQ61 176 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 RAB6BQ9NRW1 208 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 THSD1Q9NS62 852 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 NLE1Q9NVX2 485 aaPredicted RBP20.16■□□□□ 0.82
VTI1B-205ENST00000555543 ZNF624Q9P2J8 865 aaPredicted RBP20.16■□□□□ 0.82
VTI1B-205ENST00000555543 CRLS1Q9UJA2 301 aa20.16■□□□□ 0.82
VTI1B-205ENST00000555543 PRAMEF33A0A0G2JMD5 474 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 CCDC78A2IDD5 438 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 OR5K4A6NMS3 321 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 OR52A4PA6NMU1 304 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 ERI2A8K979 691 aaKnown RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 ZW10O43264 779 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 SGTAO43765 313 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 POP7O75817 140 aaKnown RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 SUN1O94901 812 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 ITGA2BP08514 1039 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 ITIH1P19827 911 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 MSH3P20585 1137 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 ITGALP20701 1170 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 MPSTP25325 297 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 PBLDP30039 288 aaPredicted RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 MC4RP32245 332 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 RPL22P35268 128 aaKnown RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 HADHAP40939 763 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 SLC19A1P41440 591 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 CDKN1CP49918 316 aaPredicted RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 PCBP4P57723 403 aaKnown RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 GPLD1P80108 840 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 SQSTM1Q13501 440 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 CLPPQ16740 277 aaPredicted RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 LONRF2Q1L5Z9 754 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 CCDC38Q502W7 563 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 FNBP1LQ5T0N5 605 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 CLEC14AQ86T13 490 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 LINC00523Q86TU6 105 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 NXPE1Q8N323 547 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 SGF29Q96ES7 293 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 NAF1Q96HR8 494 aaKnown RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 TBC1D10AQ9BXI6 508 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 STN1Q9H668 368 aaKnown RBP20.15■□□□□ 0.82
VTI1B-205ENST00000555543 PAK5Q9P286 719 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 WDR37Q9Y2I8 494 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 ZKSCAN5Q9Y2L8 839 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 FAM208BQ5VWN6 2430 aa20.15■□□□□ 0.82
VTI1B-205ENST00000555543 MROH6A6NGR9 719 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 H7C0S8 307 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 XRCC1P18887 633 aaPredicted RBP20.14■□□□□ 0.81
VTI1B-205ENST00000555543 IDSP22304 550 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 ETV5P41161 510 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 KCNJ1P48048 391 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 ARSDP51689 593 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 LIMK2P53671 638 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 DMPKQ09013 629 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 CDH17Q12864 832 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 NFE2L1Q14494 772 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 CLCA4Q14CN2 919 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 AGAP9Q5VTM2 703 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 ABRAXAS1Q6UWZ7 409 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 XKR5Q6UX68 686 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 WASH2PQ6VEQ5 465 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 SNX20Q7Z614 316 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 AMZ2Q86W34 360 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 PRELID2Q8N945 189 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 OR4D9Q8NGE8 314 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 MAIP1Q8WWC4 291 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 WASH6PQ9NQA3 447 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 PISDQ9UG56 409 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 LHX6Q9UPM6 363 aa20.14■□□□□ 0.81
VTI1B-205ENST00000555543 DRG1Q9Y295 367 aaKnown RBP20.14■□□□□ 0.81
VTI1B-205ENST00000555543 TRBV5-4A0A0C4DH59 114 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 LILRA5A6NI73 299 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 E7EVH7 732 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 RRP8O43159 456 aaKnown RBP20.13■□□□□ 0.81
VTI1B-205ENST00000555543 DUX1O43812 170 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 THRAP10827 490 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 VCLP18206 1134 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 PSMA3P25788 255 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 MLLT3P42568 568 aaPredicted RBP20.13■□□□□ 0.81
VTI1B-205ENST00000555543 ABCG1P45844 678 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms