RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 C1orf216Q8TAB5 229 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 GABPB2Q8TAK5 448 aaPredicted RBP10.63□□□□□ -0.71
TDP1-211ENST00000555178 FAM76AQ8TAV0 307 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 ANKRD49Q8WVL7 239 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 COX14Q96I36 57 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 APOPT1Q96IL0 206 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 TCF12Q99081 682 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 COPS8Q99627 209 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 DUSP15Q9H1R2 295 aaPredicted RBP10.63□□□□□ -0.71
TDP1-211ENST00000555178 SARS2Q9NP81 518 aaKnown RBP10.63□□□□□ -0.71
TDP1-211ENST00000555178 SMOXQ9NWM0 555 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 ZDHHC3Q9NYG2 299 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 ATXN10Q9UBB4 475 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 VWA7Q9Y334 891 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 PLEKHM1Q9Y4G2 1056 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 ST14Q9Y5Y6 855 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 RALGAPA1Q6GYQ0 2036 aa10.63□□□□□ -0.71
TDP1-211ENST00000555178 IGLV3-16A0A075B6K0 115 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 A0A1W2PPC4 97 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 RGSL1A5PLK6 1076 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 OR2AG2A6NM03 316 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 PRMT5O14744 637 aaPredicted RBP10.62□□□□□ -0.71
TDP1-211ENST00000555178 MAP3K13O43283 966 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 RHOBTB1O94844 696 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 PKMP14618 531 aaKnown RBP10.62□□□□□ -0.71
TDP1-211ENST00000555178 STMN1P16949 149 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 CCR5P51681 352 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 IRX4P78413 519 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 CDK3Q00526 305 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 CCDC15Q0P6D6 951 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 RNF187Q5TA31 235 aaPredicted RBP10.62□□□□□ -0.71
TDP1-211ENST00000555178 CERS6Q6ZMG9 384 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 LONP2Q86WA8 852 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 ZNF547Q8IVP9 402 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 CENPLQ8N0S6 344 aaPredicted RBP10.62□□□□□ -0.71
TDP1-211ENST00000555178 RBFAQ8N0V3 343 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 TCP10LQ8TDR4 215 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 KCTD4Q8WVF5 259 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 GPR21Q99679 349 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 APOOQ9BUR5 198 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 TEX101Q9BY14 249 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 CLPBQ9H078 707 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 MIR1-1HGQ9H1L0 117 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 OR2AG1Q9H205 316 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 FSCN3Q9NQT6 498 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 GRID1Q9ULK0 1009 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 ACTL7BQ9Y614 415 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 CABIN1Q9Y6J0 2220 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 CHN1P15882 459 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 ZNF8P17098 575 aaPredicted RBP10.62□□□□□ -0.71
TDP1-211ENST00000555178 HNRNPA2B1P22626 353 aaKnown RBP10.62□□□□□ -0.71
TDP1-211ENST00000555178 GLRBP48167 497 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 POU4F1Q01851 419 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 ZNF542PQ5EBM4 170 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 PRAMEF14Q5SWL7 426 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 FAM45BPQ6NSW5 357 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 ADAMTSL4Q6UY14 1074 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 DDHD1Q8NEL9 900 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 FAM45AQ8TCE6 357 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 C1QTNF1Q9BXJ1 281 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 SENP1Q9P0U3 644 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 GULP1Q9UBP9 304 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 FAM8A1Q9UBU6 413 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 KLF15Q9UIH9 416 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 EMCNQ9ULC0 261 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 R4GN57 208 aa10.62□□□□□ -0.71
TDP1-211ENST00000555178 COPEO14579 308 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 LILRB5O75023 590 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 WISP3O95389 354 aaPredicted RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 ESR1P03372 595 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 ZNF7P17097 686 aaPredicted RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 CHRM3P20309 590 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 SLC12A2P55011 1212 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 WDR4P57081 412 aaKnown RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 PFN3P60673 137 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 GUCY1A3Q02108 690 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 TMEM115Q12893 351 aaPredicted RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 PLA2G4EQ3MJ16 856 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 PLK5Q496M5 336 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 PTRHD1Q6GMV3 140 aaKnown RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 PAQR3Q6TCH7 311 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 Q6ZSR6 202 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 MTERF4Q7Z6M4 381 aaKnown RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 CLEC14AQ86T13 490 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 GAB3Q8WWW8 586 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 ULK4Q96C45 1275 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 HIC2Q96JB3 615 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 PKNOX2Q96KN3 472 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 FAM111AQ96PZ2 611 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 VPS35Q96QK1 796 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 CDH19Q9H159 772 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 CCDC68Q9H2F9 335 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 TCEAL2Q9H3H9 227 aaPredicted RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 GPAMQ9HCL2 828 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 FGF22Q9HCT0 170 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 RAD18Q9NS91 495 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 TMEM216Q9P0N5 145 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 SLC23A2Q9UGH3 650 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 IKZF3Q9UKT9 509 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms