RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 WDR48Q8TAF3 677 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 BAHD1Q8TBE0 780 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 HDAC10Q969S8 669 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 LRRC39Q96DD0 335 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 PDXPQ96GD0 296 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 SNF8Q96H20 258 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 DNAJC1Q96KC8 554 aaKnown RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 APOLD1Q96LR9 279 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CAMK1GQ96NX5 476 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 ERP44Q9BS26 406 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 BOCQ9BWV1 1114 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CLPBQ9H078 707 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 ABCG4Q9H172 646 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 TCEAL2Q9H3H9 227 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CHRAC1Q9NRG0 131 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 ZDHHC3Q9NYG2 299 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 GULP1Q9UBP9 304 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 SOX13Q9UN79 622 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 VPS9D1Q9Y2B5 631 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 PCNX2A6NKB5 2137 aa10.46□□□□□ -0.74
TMEM260-206ENST00000555046 URB1O60287 2271 aaKnown RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 FAM237BA0A1B0GVD1 139 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TTI1O43156 1089 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 HYAL3O43820 417 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 FUCA1P04066 466 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 POLBP06746 335 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 ATP1B2P14415 290 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 PNLIPP16233 465 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 ZNF7P17097 686 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 IDSP22304 550 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 ACRV1P26436 265 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 MGAT1P26572 445 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 ACTR1BP42025 376 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 NSG1P42857 185 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TTPAP49638 278 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TERF1P54274 439 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 DRG2P55039 364 aaKnown RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 ARL4CP56559 192 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 ACTR1AP61163 376 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 PLOD1Q02809 727 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 ITIH4Q14624 930 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 PTPRCAPQ14761 206 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 GLE1Q53GS7 698 aaKnown RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 RNASEH2BQ5TBB1 312 aaKnown RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 IZUMO3Q5VZ72 239 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 MRNIPQ6NTE8 343 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TMEM220Q6QAJ8 160 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TRIM74Q86UV6 250 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 CAND1Q86VP6 1230 aaKnown RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 AMZ2Q86W34 360 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TRAPPC5Q8IUR0 188 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 LMNTD2Q8IXW0 634 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 CEP112Q8N8E3 955 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 SH3KBP1Q96B97 665 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 SERPINB12Q96P63 405 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TCF12Q99081 682 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TIMM29Q9BSF4 260 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TSSK1BQ9BXA7 367 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 STN1Q9H668 368 aaKnown RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 SUDS3Q9H7L9 328 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 TAAR2Q9P1P5 351 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 WHRNQ9P202 907 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 KLK13Q9UKR3 277 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 PNMA8BQ9ULN7 279 aaPredicted RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 PADI4Q9UM07 663 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 BTBD3Q9Y2F9 522 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 MAD1L1Q9Y6D9 718 aa10.45□□□□□ -0.74
TMEM260-206ENST00000555046 OAS3Q9Y6K5 1087 aaKnown RBP10.45□□□□□ -0.74
TMEM260-206ENST00000555046 PTPRQQ9UMZ3 2332 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 ATMQ13315 3056 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 TRBV5-4A0A0C4DH59 114 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 KIR2DS5A0A0G2JLQ3 304 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 A0A0G2JNG1 304 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 C17orf113A0A1B0GUU1 675 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 TCRBV7S3A2A0A539 114 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 CTAGE15A4D2H0 777 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 EME2A4GXA9 379 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-206ENST00000555046 GOLGA8MH3BSY2 632 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 KIR2DS3K7RE56 304 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 GAPDHSO14556 408 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-206ENST00000555046 FANCGO15287 622 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 NUDT21O43809 227 aaKnown RBP10.44□□□□□ -0.74
TMEM260-206ENST00000555046 RFPL3O75679 317 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 POP7O75817 140 aaKnown RBP10.44□□□□□ -0.74
TMEM260-206ENST00000555046 GOT2P00505 430 aaKnown RBP10.44□□□□□ -0.74
TMEM260-206ENST00000555046 CTAGE8P0CG41 777 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 GIMD1P0DJR0 217 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 ACP5P13686 325 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 GLB1P16278 677 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 KIR2DS5Q14953 304 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 INSCQ1MX18 579 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 RNF187Q5TA31 235 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-206ENST00000555046 ANKRD22Q5VYY1 191 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 SLC30A9Q6PML9 568 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 WASH2PQ6VEQ5 465 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 TMEM135Q86UB9 458 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 SLC9B2Q86UD5 537 aa10.44□□□□□ -0.74
TMEM260-206ENST00000555046 CTAGE6Q86UF2 777 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms