RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 HOXC9P31274 260 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 APOBEC1P41238 236 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 RAD23BP54727 409 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 HNRNPH2P55795 449 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 FOXM1Q08050 763 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 MAD2L1Q13257 205 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 UBE2V1Q13404 147 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 BAATQ14032 418 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 PSMD6Q15008 389 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 OASLQ15646 514 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 CTF1Q16619 201 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 IZUMO4Q1ZYL8 232 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 FAM98BQ52LJ0 330 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF628Q5EBL2 1059 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 KCNT1Q5JUK3 1230 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 DCST1Q5T197 706 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 KRT79Q5XKE5 535 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 RGMBQ6NW40 437 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 KCTD18Q6PI47 426 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 RHBDF2Q6PJF5 856 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 LDB1Q86U70 411 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 NRROSQ86YC3 692 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 RBM15BQ8NDT2 890 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 SPATA22Q8NHS9 363 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 MRPS27Q92552 414 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 MOAP1Q96BY2 351 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 RMDN1Q96DB5 314 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 SCMH1Q96GD3 660 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 SEMA3CQ99985 751 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 RTN4RQ9BZR6 473 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 RABEP2Q9H5N1 569 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 C17orf75Q9HAS0 396 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 PSD3Q9NYI0 1048 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 HAO2Q9NYQ3 351 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 C1RLQ9NZP8 487 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 MARCH4Q9P2E8 410 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 LARSQ9P2J5 1176 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 DNAJB4Q9UDY4 337 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 DBNLQ9UJU6 430 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 ACSL5Q9ULC5 683 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF148Q9UQR1 794 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 KLHL20Q9Y2M5 609 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 A0A0B4J293 547 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 TRBC2A0A5B9 178 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 TMEM8BA6NDV4 472 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 SMTNL1A8MU46 457 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 MAP2K7O14733 419 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ANKRD28O15084 1053 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 SPINT2O43291 252 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ZBTB43O43298 467 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF217O75362 1048 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 C22orf31O95567 290 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 TPOP07202 933 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 DDX5P17844 614 aaKnown RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 GABRA5P31644 462 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 GAS1P54826 345 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 CLDN20P56880 219 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 TAS2R38P59533 333 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 COG7P83436 770 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 PPARDQ03181 441 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 DLG1Q12959 904 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ALCAMQ13740 583 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 SNAPC1Q16533 368 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 MEP1AQ16819 746 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 C15orf59Q2T9L4 293 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 KIF19Q2TAC6 998 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ATP13A5Q4VNC0 1218 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 KRBOX4Q5JUW0 171 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 C1QTNF12Q5T7M4 302 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ALS2CLQ60I27 953 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 RAD9BQ6WBX8 426 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ATG9AQ7Z3C6 839 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 HAUS6Q7Z4H7 955 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 KRT77Q7Z794 578 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ADIPOR2Q86V24 386 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 CHERPQ8IWX8 916 aaKnown RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 HACE1Q8IYU2 909 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 GUF1Q8N442 669 aaKnown RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 TC2NQ8N9U0 490 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 OR5R1Q8NH85 324 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 LILRB1Q8NHL6 650 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 CFAP61Q8NHU2 1237 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 TBC1D16Q8TBP0 767 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 WFIKKN2Q8TEU8 576 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 SLC44A1Q8WWI5 657 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF830Q96NB3 372 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 MTERF1Q99551 399 aaKnown RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 GFI1Q99684 422 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 OLFM1Q99784 485 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 SH3GL2Q99962 352 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 SPATC1LQ9H0A9 340 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 SEMA6AQ9H2E6 1030 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 KCNK15Q9H427 330 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 DDX31Q9H8H2 851 aaKnown RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF556Q9HAH1 456 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 CHMP1AQ9HD42 196 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 GDE1Q9NZC3 331 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 CRNNQ9UBG3 495 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-213ENST00000554776 KCNS2Q9ULS6 477 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms