RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 NKAIN2Q5VXU1 208 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ANKS6Q68DC2 871 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ATL3Q6DD88 541 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TMEM71Q6P5X7 295 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TEPPQ6URK8 271 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 CEACAM20Q6UY09 585 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 C11orf57Q6ZUT1 292 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 RRAGAQ7L523 313 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TIPARPQ7Z3E1 657 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TFAP2DQ7Z6R9 452 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF683Q8IZ20 524 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 UNC5BQ8IZJ1 945 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ESX1Q8N693 406 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 OR2AP1Q8NGE2 309 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 OR56A4Q8NGH8 313 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 OR6K2Q8NGY2 324 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 OR1E3Q8WZA6 343 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 STARD8Q92502 1023 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ARHGEF2Q92974 986 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 KAT5Q92993 513 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 SLC35C1Q96A29 364 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 VOPP1Q96AW1 172 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 C8orf49Q96NF6 230 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 WRAP53Q9BUR4 548 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 C1QTNF3Q9BXJ4 246 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TM6SF2Q9BZW4 377 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ZYG11BQ9C0D3 744 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TMEM168Q9H0V1 697 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF768Q9H5H4 540 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 RETREG1Q9H6L5 497 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 FBXO8Q9NRD0 319 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 SPATS2LQ9NUQ6 558 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ARHGEF38Q9NXL2 777 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 PDP2Q9P2J9 529 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ARMCX3Q9UH62 379 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TLK1Q9UKI8 766 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 CFAP45Q9UL16 551 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 HPCAL4Q9UM19 191 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 CNTN6Q9UQ52 1028 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 MFHAS1Q9Y4C4 1052 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 TMEM184BQ9Y519 407 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 OR1A2Q9Y585 309 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 NBASA2RRP1 2371 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 TEP1Q99973 2627 aaKnown RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 IGHV1OR21-1A0A087WYE8 117 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 A0A1B0GVL5 298 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 CFAP69A5D8W1 941 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 P4HA2O15460 535 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 RFPL1O75677 317 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 LETM1O95202 739 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 CLDN1O95832 211 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 THRAP10827 490 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 KRT5P13647 590 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 CCNB1P14635 433 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF20P17024 532 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 TNFRSF1AP19438 455 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 CMA1P23946 247 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 TRIM23P36406 574 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 FMO5P49326 533 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 KIAA1024LP59773 190 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 SLC6A3Q01959 620 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 INPP5JQ15735 1006 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 UGP2Q16851 508 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 KRTAP21-3Q3LHN1 58 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 LRRC73Q5JTD7 316 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 KCTD16Q68DU8 428 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ERAP2Q6P179 960 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ARHGAP22Q7Z5H3 698 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 APLFQ8IW19 511 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 WDTC1Q8N5D0 677 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 BMPERQ8N8U9 685 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF397Q8NF99 534 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 CCL4L1Q8NHW4 92 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 CASKIN2Q8WXE0 1202 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 FUBP1Q96AE4 644 aaKnown RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 PGAP3Q96FM1 320 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 HMCESQ96FZ2 354 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 PDXPQ96GD0 296 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 LCORQ96JN0 433 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 GDAP1L1Q96MZ0 367 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 NPY6RQ99463 290 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 TSG101Q99816 390 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 GSDMCQ9BYG8 508 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 SLC29A3Q9BZD2 475 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 TTYH3Q9C0H2 523 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 FGF22Q9HCT0 170 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 MRPL40Q9NQ50 206 aaKnown RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ANLNQ9NQW6 1124 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 PIGVQ9NUD9 493 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms