RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 A0A1B0GVM2 712 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 KLHL33A6NCF5 533 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 C4orf47A7E2U8 309 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TTC34A8MYJ7 566 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SYNCRIPO60506 623 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 CNTN5O94779 1100 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ZFPL1O95159 310 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ADCY5O95622 1261 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ATP5BP06576 529 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SRPRAP08240 638 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SLC2A3P11169 496 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 UNGP13051 313 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ATP1A3P13637 1013 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PDGFRAP16234 1089 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ENGP17813 658 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ABCB4P21439 1286 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 MMP8P22894 467 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 OXTRP30559 389 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 CCR1P32246 355 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 CXCR5P32302 372 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 RDXP35241 583 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ADRA1BP35368 520 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 STAT1P42224 750 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PTH2RP49190 550 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 CXCR3P49682 368 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 STK19P49842 368 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TPMTP51580 245 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PLK1P53350 603 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 POLR2FP61218 127 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 CDR2Q01850 454 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 UBXN1Q04323 297 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SCAPQ12770 1279 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 MTA1Q13330 715 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 MPP3Q13368 585 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 DUOXA1Q1HG43 343 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 HNRNPA1L2Q32P51 320 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 INAVAQ3KP66 663 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 UAP1L1Q3KQV9 507 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 C3orf36Q3SXR2 165 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SLC25A52Q3SY17 297 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ANO6Q4KMQ2 910 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 RAB6CQ53S08 254 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ALFQ53S48 1182 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 BRMS1LQ5PSV4 323 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 C9orf64Q5T6V5 341 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF776Q68DI1 518 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 IL31Q6EBC2 164 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TRIM72Q6ZMU5 477 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ARCQ7LC44 396 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ERICH1Q86X53 443 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF677Q86XU0 584 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 DHX40Q8IX18 779 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 CCAR2Q8N163 923 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ZCCHC9Q8N567 271 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 AOPEPQ8N6M6 819 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 KDM1BQ8NB78 822 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 DNASE2BQ8WZ79 361 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 LINC00476Q8WZB0 136 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PRCCQ92733 491 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 FAM131CQ96AQ9 280 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 NACC2Q96BF6 587 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PTCD3Q96EY7 689 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TEKT5Q96M29 485 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PCDHB18PQ96TA0 734 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TBCBQ99426 244 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PSMB7Q99436 277 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 C11orf70Q9BRQ4 267 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SYT11Q9BT88 431 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 GPR174Q9BXC1 333 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TLR10Q9BXR5 811 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TKTL2Q9H0I9 626 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 RAB6CQ9H0N0 254 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 RSPH9Q9H1X1 276 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PDCL3Q9H2J4 239 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PABPC3Q9H361 631 aaKnown RBP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SYNCQ9H7C4 482 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SYNPO2LQ9H987 977 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 GALNT9Q9HCQ5 603 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 NLRC4Q9NPP4 1024 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TMEM9BQ9NQ34 198 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PIGVQ9NUD9 493 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 TBCCD1Q9NVR7 557 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 RRN3Q9NYV6 651 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.24□□□□□ -1.73
VTI1B-203ENST00000554636 COX16Q9P0S2 106 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF212Q9UDV6 495 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 KCNE5Q9UJ90 142 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 VANGL2Q9ULK5 521 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 STAP1Q9ULZ2 295 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 NEU3Q9UQ49 428 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 ERVW-1Q9UQF0 538 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 OR51B4Q9Y5P0 310 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 SLCO1B1Q9Y6L6 691 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 PLXNA2O75051 1894 aa4.24□□□□□ -1.73
VTI1B-203ENST00000554636 MAP1BP46821 2468 aaKnown RBP4.23□□□□□ -1.73
VTI1B-203ENST00000554636 DOCK9Q9BZ29 2069 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 CACNA1BQ00975 2339 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 IGLV3-10A0A075B6K4 115 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TCRBV5S1A1TA0A578 114 aa4.23□□□□□ -1.73
VTI1B-203ENST00000554636 TARSL2A2RTX5 802 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms