RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 TGM2P21980 687 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLC7A1P30825 629 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 MAT2AP31153 395 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 NNMTP40261 264 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CSKP41240 450 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 STAT6P42226 847 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 HTR3AP46098 478 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 PSMD8P48556 350 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 PIK3CGP48736 1102 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLC11A2P49281 568 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CASP4P49662 377 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLC8A3P57103 927 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 RAP2BP61225 183 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 ECT2LQ008S8 904 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 INCA1Q0VD86 236 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 ELAVL3Q14576 367 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 LONRF1Q17RB8 773 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 RAB41Q5JT25 222 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 FAM46CQ5VWP2 391 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 NEK5Q6P3R8 708 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CLEC18BQ6UXF7 455 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 RBM44Q6ZP01 1051 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 DOK3Q7L591 496 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 PIGZQ86VD9 579 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 TRIM69Q86WT6 500 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 MFN1Q8IWA4 741 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 UNC45BQ8IWX7 931 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 C12orf56Q8IXR9 622 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 STK40Q8N2I9 435 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CLEC18CQ8NCF0 446 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 RNF139Q8WU17 664 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 FAM131CQ96AQ9 280 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 TWNKQ96RR1 684 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 DDX50Q9BQ39 737 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CPEB1Q9BZB8 566 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLC25A18Q9H1K4 315 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLAMF7Q9NQ25 335 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 FBXO34Q9NWN3 711 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 FAM30AQ9NZY2 134 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 HMGXB4Q9UGU5 601 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLCO3A1Q9UIG8 710 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 ING1Q9UK53 422 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 INTS6Q9UL03 887 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLC45A2Q9UMX9 530 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 MAN2B2Q9Y2E5 1009 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CSNK1G3Q9Y6M4 447 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 MYOFQ9NZM1 2061 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 UNC79Q9P2D8 2635 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 OBSL1O75147 1896 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CCDC187A0A096LP49 1063 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 GOLGA6L7A0A1B0GV03 622 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TYW5A2RUC4 315 aaKnown RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 EME2A4GXA9 379 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 LRRIQ3A6PVS8 624 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TMX2-CTNND1H3BSU7 103 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 IKBKBO14920 756 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SLC31A1O15431 190 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ACSL4O60488 711 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 RTN2O75298 545 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 GJB2P29033 226 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SLC5A2P31639 672 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 DRD3P35462 400 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 MAN2A2P49641 1150 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 PRIM2P49643 509 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TKTL1P51854 596 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SOX8P57073 446 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 HNRNPKP61978 463 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 FMO1Q01740 532 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SULT2A1Q06520 285 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CCDC15Q0P6D6 951 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 EIF3IQ13347 325 aaKnown RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ZNF177Q13360 481 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TUBA3CQ13748 450 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 MORC3Q14149 939 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CNGA2Q16280 664 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 CDKN3Q16667 212 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 KNOP1Q1ED39 458 aaKnown RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 POM121L1PQ3SYA9 428 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ZACNQ401N2 412 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 BSPRYQ5W0U4 402 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 NUGGCQ68CJ6 796 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SPOPLQ6IQ16 392 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 RFWD3Q6PCD5 774 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TUBA3EQ6PEY2 450 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 EFL1Q7Z2Z2 1120 aaKnown RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 DSG4Q86SJ6 1040 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SRLQ86TD4 932 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 NELFCDQ8IXH7 590 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 FBXO39Q8N4B4 442 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 TTC39CQ8N584 583 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ANKRD52Q8NB46 1076 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 HJURPQ8NCD3 748 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-228ENST00000554592 GOLGA5Q8TBA6 731 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 WFDC5Q8TCV5 224 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 ARRDC3Q96B67 414 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 SPAG5Q96R06 1193 aa4.95□□□□□ -1.62
ATXN3-228ENST00000554592 MNTQ99583 582 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms