RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 KHDC1Q4VXA5 237 aaKnown RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 N4BP2L1Q5TBK1 243 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 HHATQ5VTY9 493 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CWF19L1Q69YN2 538 aaKnown RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 CDHR3Q6ZTQ4 885 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 FAM124AQ86V42 546 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 PIM3Q86V86 326 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 HEATR4Q86WZ0 1026 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ZBTB2Q8N680 514 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CLDN19Q8N6F1 224 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ANKRD42Q8N9B4 389 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 RHEBL1Q8TAI7 183 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 FAM174AQ8TBP5 190 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 RDH11Q8TC12 318 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 KCTD4Q8WVF5 259 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 INPP5DQ92835 1189 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CCDC97Q96F63 343 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 TOE1Q96GM8 510 aaKnown RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 PDLIM5Q96HC4 596 aaKnown RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 LINC00615Q96LM1 132 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 FAM111AQ96PZ2 611 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 MRPL57Q9BQC6 102 aaKnown RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 DERL2Q9GZP9 239 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CCDC134Q9H6E4 229 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 NMRAL1Q9HBL8 299 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CD93Q9NPY3 652 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 PHPT1Q9NRX4 125 aaPredicted RBP7.55□□□□□ -1.2
TDP1-209ENST00000554180 IGSF5Q9NSI5 407 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 DLGAP2Q9P1A6 1054 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 ADAM21Q9UKJ8 722 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 CYP8B1Q9UNU6 501 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 GPR34Q9UPC5 381 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 DMTF1Q9Y222 760 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 PRSS21Q9Y6M0 314 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 TRPM6Q9BX84 2022 aa7.55□□□□□ -1.2
TDP1-209ENST00000554180 IGHV1OR15-9A0A0B4J2B8 117 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 C17orf113A0A1B0GUU1 675 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PRR23AA6NEV1 266 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 K7ESF4 209 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 CACNB4O00305 520 aaPredicted RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 FPGTO14772 594 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 CHUKO15111 745 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 INPP4BO15327 924 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 SGTAO43765 313 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 SHOX2O60902 331 aaPredicted RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 MTX2O75431 263 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 CDK14O94921 469 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 TRIM16O95361 564 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 TSPAN12O95859 305 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PROCP04070 461 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PCCBP05166 539 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 DCNP07585 359 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 CCDC166P0CW27 439 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 CD1DP15813 335 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 KELP23276 732 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 AKT2P31751 481 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 IGFALSP35858 605 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 MAPK9P45984 424 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 WDR4P57081 412 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 KIAA1024LP59773 190 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 IL2P60568 153 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PLOD1Q02809 727 aaPredicted RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 CSHL1Q14406 222 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 GBX1Q14549 363 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 INPP5AQ14642 412 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PLEKHS1Q5SXH7 462 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 KIAA0895LQ68EN5 471 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 LVRNQ6Q4G3 990 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PAQR3Q6TCH7 311 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 TMEM207Q6UWW9 146 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 RGS9BPQ6ZS82 235 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 NEK10Q6ZWH5 1172 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 OTOAQ7RTW8 1153 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 ADGRG6Q86SQ4 1221 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 ADAMTSL2Q86TH1 951 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.54□□□□□ -1.2
TDP1-209ENST00000554180 TRIM42Q8IWZ5 723 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PLD6Q8N2A8 252 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 PELI3Q8N2H9 469 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 RASGEF1AQ8N9B8 481 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 SIDT2Q8NBJ9 832 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 TMEM145Q8NBT3 493 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 PLA2G15Q8NCC3 412 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 CADM4Q8NFZ8 388 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 RAB3IL1Q8TBN0 382 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 MDM1Q8TC05 714 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 ANKRD49Q8WVL7 239 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 DYDC1Q8WWB3 177 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 SREK1Q8WXA9 508 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 SGF29Q96ES7 293 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 GPR78Q96P69 363 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 CAPS2Q9BXY5 557 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 OR2AG1Q9H205 316 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 MRPL46Q9H2W6 279 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 TFB2MQ9H5Q4 396 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 RMI1Q9H9A7 625 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 SARS2Q9NP81 518 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms