RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 NOP2P46087 812 aaKnown RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 CAPZBP47756 277 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 WNT3AP56704 352 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 COPS2P61201 443 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 MC1RQ01726 317 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 TMEM115Q12893 351 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ITGA9Q13797 1035 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 GTF2H3Q13889 308 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 IL11RAQ14626 422 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SPA17Q15506 151 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SLC1A5Q15758 541 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ATP13A5Q4VNC0 1218 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 KHDC1Q4VXA5 237 aaKnown RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SIRPB2Q5JXA9 342 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 LDLRAP1Q5SW96 308 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 CYB5D1Q6P9G0 228 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 BORAQ6PGQ7 559 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 CRTC3Q6UUV7 619 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 BBS12Q6ZW61 710 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 KDELC2Q7Z4H8 507 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 PRSS42Q7Z5A4 293 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 C11orf96Q7Z7L8 435 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 TRIM48Q8IWZ4 208 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF567Q8N184 647 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 DDHD1Q8NEL9 900 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 KIAA1143Q96AT1 154 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 RBM41Q96IZ5 413 aaKnown RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 MRGPRX2Q96LB1 330 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 C9orf72Q96LT7 481 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 QKIQ96PU8 341 aaKnown RBP eCLIP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 BAG1Q99933 345 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 TBC1D10AQ9BXI6 508 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 FAM117AQ9C073 453 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 OSGEPL1Q9H4B0 414 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF768Q9H5H4 540 aaKnown RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SLC40A1Q9NP59 571 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 ARFGAP3Q9NP61 516 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 IL26Q9NPH9 171 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 OGFRQ9NZT2 677 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 IL17CQ9P0M4 197 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SCHIP1Q9P0W5 487 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SEMA5BQ9P283 1151 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 KLHL8Q9P2G9 620 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SAE1Q9UBE0 346 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SLC23A2Q9UGH3 650 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 TMPRSS11EQ9UL52 423 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 SPO11Q9Y5K1 396 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 HEMK1Q9Y5R4 338 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 MAST4O15021 2626 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 UBR5O95071 2799 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-203ENST00000554074 PTPN13Q12923 2485 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 DOPEY2Q9Y3R5 2298 aa6.5□□□□□ -1.37
SLIRP-203ENST00000554074 PCM1Q15154 2024 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 NAV2Q8IVL1 2488 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 GLYATL1P3A0A0U1RQE8 302 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 A8MU76 341 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PDZK1P1A8MUH7 402 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 BTNL10A8MVZ5 291 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 APOC4-APOC2K7ER74 178 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 TERTO14746 1132 aaKnown RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 POLR1CO15160 346 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ARHGAP6O43182 974 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 SUV39H1O43463 412 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 SLC28A2O43868 658 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 MTX2O75431 263 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ANXA9O76027 345 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 STK17BO94768 372 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 RECKO95980 971 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 APOC2P02655 101 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 SLC4A1P02730 911 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 FAM87AP0C7U9 286 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 TNNT1P13805 278 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 AMD1P17707 334 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PTPN7P35236 360 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 HALP42357 657 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 MAPK9P45984 424 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 CCR10P46092 362 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PPM1FP49593 454 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 GEMP55040 296 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 GFERP55789 205 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ADCY2Q08462 1091 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 NFATC3Q12968 1075 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 GPR18Q14330 331 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 NOMO1Q15155 1222 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 SNAP47Q5SQN1 464 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF648Q5T619 568 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ITPRIPL1Q6GPH6 555 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 KLHL35Q6PF15 583 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ATG14Q6ZNE5 492 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 PID1Q7Z2X4 250 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 TIPARPQ7Z3E1 657 aaKnown RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 GLT6D1Q7Z4J2 308 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ZC3H18Q86VM9 953 aaKnown RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 AMZ2Q86W34 360 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-203ENST00000554074 TRAPPC5Q8IUR0 188 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ESX1Q8N693 406 aa6.49□□□□□ -1.37
SLIRP-203ENST00000554074 ZFPM2Q8WW38 1151 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms