RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 KMT2BQ9UMN6 2715 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 ANKRD36A6QL64 1941 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 WDR87Q6ZQQ6 2873 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 HEATR9A2RTY3 570 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 EME2A4GXA9 379 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-209ENST00000553855 RHPN2P1A8MT19 583 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 FADS2P1A8MWK0 482 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 F8W8V4 182 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 AURKAO14965 403 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 KMOO15229 486 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 GRID2O43424 1007 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 BUD23O43709 281 aaKnown RBP8.24□□□□□ -1.09
PSEN1-209ENST00000553855 NUAK1O60285 661 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 PRAMEF1O95521 474 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ADRA1AP35348 466 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 PPARGP37231 505 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-209ENST00000553855 POLD2P49005 469 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 SHC2P98077 582 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 CTBSQ01459 385 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 UBAP2LQ14157 1087 aaKnown RBP8.24□□□□□ -1.09
PSEN1-209ENST00000553855 POU6F1Q14863 301 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ZRANB3Q5FWF4 1079 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ZNF449Q6P9G9 518 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 SLC30A9Q6PML9 568 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 NLRP9Q7RTR0 991 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 LRRTM4Q86VH4 590 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 RELL1Q8IUW5 271 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 RASGEF1CQ8N431 466 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 TTC30BQ8N4P2 665 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 PPHLN1Q8NEY8 458 aaKnown RBP8.24□□□□□ -1.09
PSEN1-209ENST00000553855 OR4K2Q8NGD2 314 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ZNF398Q8TD17 642 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ACTRT1Q8TDG2 376 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 GPBAR1Q8TDU6 330 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 STYXQ8WUJ0 223 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 COX14Q96I36 57 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ZNF514Q96K75 400 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-209ENST00000553855 RUNDC3BQ96NL0 473 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 VPS35Q96QK1 796 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 TCF12Q99081 682 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 C19orf43Q9BQ61 176 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 BOCQ9BWV1 1114 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 AP1M1Q9BXS5 423 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 CLPBQ9H078 707 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 OSGEPL1Q9H4B0 414 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ASB8Q9H765 288 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 BFARQ9NZS9 450 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 TAAR2Q9P1P5 351 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 TTC7AQ9ULT0 858 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-209ENST00000553855 MSRB2Q9Y3D2 182 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 ARL5AQ9Y689 179 aa8.24□□□□□ -1.09
PSEN1-209ENST00000553855 OR5K4A6NMS3 321 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SNX2O60749 519 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 KCNJ13O60928 360 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SRP72O76094 671 aaKnown RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 ECEL1O95672 775 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 MT-CO3P00414 261 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SOD1P00441 154 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 KRT14P02533 472 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 CELA2BP08218 269 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 ACP5P13686 325 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 GLB1P16278 677 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TPH1P17752 444 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 RPL22P35268 128 aaKnown RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 KCNJ1P48048 391 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TMPRSS15P98073 1019 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 CDK16Q00536 496 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 HYAL2Q12891 473 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TMEM115Q12893 351 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SEMA5AQ13591 1074 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SPIDRQ14159 915 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 PPP1R7Q15435 360 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SMAD1Q15797 465 aaKnown RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 CHRNA6Q15825 494 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 GPR33Q49SQ1 333 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 ATP13A5Q4VNC0 1218 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 C14orf28Q4W4Y0 310 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 PYCR3Q53H96 274 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 HES3Q5TGS1 186 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 GUSBP11Q6P575 273 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 CCDC137Q6PK04 289 aaKnown RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 CRTC3Q6UUV7 619 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TAS2R42Q7RTR8 314 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TMPRSS7Q7RTY8 843 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 ADGRG6Q86SQ4 1221 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SLC9B2Q86UD5 537 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TRAPPC5Q8IUR0 188 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 CCNJLQ8IV13 435 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TRIM48Q8IWZ4 208 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SLC35F3Q8IY50 421 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 PRELID2Q8N945 189 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 OR52K1Q8NGK4 314 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SH3KBP1Q96B97 665 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 EID2BQ96D98 161 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TRIM44Q96DX7 344 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SCARF2Q96GP6 870 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 DEPDC7Q96QD5 511 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 WDR24Q96S15 920 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 VPS37BQ9H9H4 285 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms