RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 WDR24Q96S15 920 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 MGME1Q9BQP7 344 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 GPATCH2LQ9NWQ4 482 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.25
PRPF39-204ENST00000553605 DNAJC16Q9Y2G8 782 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 ZDHHC9Q9Y397 364 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 CSAG2Q9Y5P2 127 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 ADGRG1Q9Y653 693 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 ZGRF1Q86YA3 2104 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 A0A1W2PQJ5 194 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 UBA6A0AVT1 1052 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-204ENST00000553605 SIGLEC16A6NMB1 481 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 FZD6O60353 706 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 CLDN7O95471 211 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 PEX11BO96011 259 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 RPL10P27635 214 aaKnown RBP13.51□□□□□ -0.25
PRPF39-204ENST00000553605 RORAP35398 523 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 ZNF648Q5T619 568 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-204ENST00000553605 HENMT1Q5T8I9 393 aaKnown RBP13.51□□□□□ -0.25
PRPF39-204ENST00000553605 KLHL35Q6PF15 583 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 FAM198BQ6UWH4 519 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 SPOCD1Q6ZMY3 1216 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 RFX8Q6ZV50 586 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 MRGPREQ86SM8 312 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 BBS5Q8N3I7 341 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 WDR77Q9BQA1 342 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-204ENST00000553605 OR2AG1Q9H205 316 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 FAM83DQ9H4H8 585 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 DHX35Q9H5Z1 703 aaKnown RBP13.51□□□□□ -0.25
PRPF39-204ENST00000553605 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 ADAM22Q9P0K1 906 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 AP4E1Q9UPM8 1137 aa13.51□□□□□ -0.25
PRPF39-204ENST00000553605 TLCD2A6NGC4 264 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 BIN1O00499 593 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 PEX12O00623 359 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 NADKO95544 446 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 IGHEP01854 428 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 FECHP22830 423 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 MTIF2P46199 727 aaKnown RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 EPHB1P54762 984 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 GSCP56915 257 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 CDR2Q01850 454 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 SSPNQ14714 243 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 NCF4Q15080 339 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 HIF1AQ16665 826 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 CA9Q16790 459 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 DNTTIP2Q5QJE6 756 aaKnown RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 TMTC4Q5T4D3 741 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 KLHDC7AQ5VTJ3 777 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 CRTC3Q6UUV7 619 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 WASH2PQ6VEQ5 465 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 SYTL1Q8IYJ3 562 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 ZNF808Q8N4W9 903 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 C3orf20Q8ND61 904 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 AGAP3Q96P47 875 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 CD180Q99467 661 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 CNPY3Q9BT09 278 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 TRIM39Q9HCM9 518 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 PCMTD2Q9NV79 361 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 SUCOQ9UBS9 1254 aaKnown RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 NOCTQ9UK39 431 aaKnown RBP13.5□□□□□ -0.25
PRPF39-204ENST00000553605 DNPEPQ9ULA0 475 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 PADI2Q9Y2J8 665 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 FER1L5A0AVI2 2057 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 SPG11Q96JI7 2443 aa13.5□□□□□ -0.25
PRPF39-204ENST00000553605 MYO7BQ6PIF6 2116 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 ANKRD62A6NC57 917 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 GOLGA6L4A6NEF3 574 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 EIF3CLB5ME19 914 aaKnown RBP13.49□□□□□ -0.25
PRPF39-204ENST00000553605 GPR89AB7ZAQ6 455 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 KMOO15229 486 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 JRKO75564 520 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 ZBTB11O95625 1053 aaPredicted RBP13.49□□□□□ -0.25
PRPF39-204ENST00000553605 GPR89BP0CG08 455 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 CD1EP15812 388 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 CHRNB2P17787 502 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 IDSP22304 550 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 HADHAP40939 763 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 SPINT3P49223 89 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 DRG2P55039 364 aaKnown RBP13.49□□□□□ -0.25
PRPF39-204ENST00000553605 SOX8P57073 446 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 FMO1Q01740 532 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 CDC16Q13042 620 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 PLCL1Q15111 1095 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
PRPF39-204ENST00000553605 DNAJB14Q8TBM8 379 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 PPP4R1Q8TF05 950 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 EIF3CQ99613 913 aaKnown RBP13.49□□□□□ -0.25
PRPF39-204ENST00000553605 SLX1AQ9BQ83 275 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 NAA15Q9BXJ9 866 aaKnown RBP13.49□□□□□ -0.25
PRPF39-204ENST00000553605 VPS16Q9H269 839 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
PRPF39-204ENST00000553605 F8VZ95 297 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms