RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 DNAJC3Q13217 504 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 TNFAIP8L3Q5GJ75 292 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 TMEM220Q6QAJ8 160 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 CRTC3Q6UUV7 619 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 TMEM105Q8N8V8 129 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 RASGEF1AQ8N9B8 481 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 DDHD1Q8NEL9 900 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 SCG3Q8WXD2 468 aaKnown RBP8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 TSNARE1Q96NA8 513 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 IER2Q9BTL4 223 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 MIR1-1HGQ9H1L0 117 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 EBF2Q9HAK2 575 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 MLXIPLQ9NP71 852 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 PHPT1Q9NRX4 125 aaPredicted RBP8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 SENP1Q9P0U3 644 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 ATXN10Q9UBB4 475 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 MBD1Q9UIS9 605 aaPredicted RBP8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 TRMT6Q9UJA5 497 aaKnown RBP8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 ACOT9Q9Y305 439 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 PRKAB1Q9Y478 270 aa8.62□□□□□ -1.03
AC055716.2-201ENST00000552545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 MEI4A8MW99 385 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 SCAMP1O15126 338 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 IGHV4-34P06331 123 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CCDC166P0CW27 439 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 C7P10643 843 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 FDXRP22570 491 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 MAOBP27338 520 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CRABP2P29373 138 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 GLRBP48167 497 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CCT5P48643 541 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 GYS2P54840 703 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 PPP2R2AP63151 447 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 BOP1Q14137 746 aaKnown RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CSHL1Q14406 222 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 AGERQ15109 404 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 PLA2G4EQ3MJ16 856 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 PAQR3Q6TCH7 311 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ADAMTSL4Q6UY14 1074 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TIFABQ6ZNK6 161 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ADGRG6Q86SQ4 1221 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TBC1D1Q86TI0 1168 aaPredicted RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TAX1BP1Q86VP1 789 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 NLRP8Q86W28 1048 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TRAPPC5Q8IUR0 188 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 C1orf210Q8IVY1 113 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TMEFF1Q8IYR6 380 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CCDC63Q8NA47 563 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 FAM76AQ8TAV0 307 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 MDM1Q8TC05 714 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 LKAAEAR1Q8TD35 194 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 DTX3LQ8TDB6 740 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 HEXDCQ8WVB3 486 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 KCTD4Q8WVF5 259 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 FUBP1Q96AE4 644 aaKnown RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 SCYL1Q96KG9 808 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 APOOQ9BUR5 198 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ZCCHC2Q9C0B9 1178 aaKnown RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TRIM39Q9HCM9 518 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 AASDHPPTQ9NRN7 309 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ZNF358Q9NW07 568 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ZNHIT2Q9UHR6 403 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CORO1CQ9ULV4 474 aaPredicted RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 RUVBL2Q9Y230 463 aaKnown RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TMEM120BA0PK00 339 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CACNB4O00305 520 aaPredicted RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 SH3BP5O60239 455 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 SLC35E2BP0CK96 405 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ZNF8P17098 575 aaPredicted RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 BCKDHBP21953 392 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 RPS3P23396 243 aaKnown RBP eCLIP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 RPA3P35244 121 aaPredicted RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CTSCP53634 463 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 UGT3A1Q6NUS8 523 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 C16orf46Q6P387 395 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ZNF771Q7L3S4 317 aaPredicted RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 OTOAQ7RTW8 1153 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 RD3Q7Z3Z2 195 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 RGL4Q8IZJ4 473 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 PLD6Q8N2A8 252 aaKnown RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TCP10LQ8TDR4 215 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 SKA2Q8WVK7 121 aaPredicted RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 CABS1Q96KC9 395 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 PANX3Q96QZ0 392 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 SLC30A3Q99726 388 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 ARPC5LQ9BPX5 153 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 EIF2B4Q9UI10 523 aaKnown RBP8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 COMMD10Q9Y6G5 202 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TTC28Q96AY4 2481 aa8.61□□□□□ -1.03
AC055716.2-201ENST00000552545 TDRD6O60522 2096 aaKnown RBP8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 IGLV3-16A0A075B6K0 115 aa8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 FAM86C2PA6NEL3 165 aa8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 PRAMEF26H0Y7S4 382 aa8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 H3BMM5 538 aa8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 CCR5P51681 352 aa8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 THOP1P52888 689 aa8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 ADARP55265 1226 aaKnown RBP8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 TIAL1Q01085 375 aaKnown RBP eCLIP8.6□□□□□ -1.03
AC055716.2-201ENST00000552545 ILF2Q12905 390 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms