RNA–Protein interactions for RNA: ENST00000552240.6

PRICKLE1-209, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-209ENST00000552240 PRPF19Q9UMS4 504 aaKnown RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ZFC3H1O60293 1989 aaKnown RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 H3BNC9 293 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 HMGA1P17096 107 aaKnown RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 LBPP18428 481 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 EEF1B2P24534 225 aaKnown RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 GSSP48637 474 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 FAM189BP81408 668 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ABRAXAS2Q15018 415 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 MYLK3Q32MK0 819 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ARHGAP18Q8N392 663 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 FAM86B1Q8N7N1 296 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 PNPT1Q8TCS8 783 aaKnown RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 CD200R1Q8TD46 325 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 TMEM169Q96HH4 297 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 CCT7Q99832 543 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ALG2Q9H553 416 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 PDP2Q9P2J9 529 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 CCL26Q9Y258 94 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 YIPF1Q9Y548 306 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 DRGXA6NNA5 263 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 SYN3O14994 580 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 IGHA2P01877 340 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ZNF23P17027 643 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 PRKACGP22612 351 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 SLC6A2P23975 617 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 CD70P32970 193 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ZNF140P52738 457 aaPredicted RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 OR4D2P58180 307 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 TLE2Q04725 743 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 PIGFQ07326 219 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 CBLBQ13191 982 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ADGRF1Q5T601 910 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 CLEC4FQ8N1N0 589 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 TEX26Q8N6G2 289 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 OR4F6Q8NGB9 312 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 SNRNP27Q8WVK2 155 aaKnown RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 SGCDQ92629 289 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 SCAMP4Q969E2 229 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 ASB9Q96DX5 294 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 FEM1CQ96JP0 617 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 THUMPD3Q9BV44 507 aaKnown RBP12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 BBS2Q9BXC9 721 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 IPPKQ9H8X2 491 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 RNF11Q9Y3C5 154 aa12.09□□□□□ -0.47
PRICKLE1-209ENST00000552240 SCN5AQ14524 2016 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 DOCK4Q8N1I0 1966 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ZBBXA8MT70 800 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 EI24O14681 340 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CYBBP04839 570 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 KCNK10P57789 538 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 LCP2Q13094 533 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 C11orf91Q3C1V1 193 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ZSWIM9Q86XI8 627 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 NPAS4Q8IUM7 802 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CPSF7Q8N684 471 aaKnown RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ZFP28Q8NHY6 868 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 SEPT8Q92599 483 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 LRRC58Q96CX6 371 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ASIC4Q96FT7 647 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 FEM1AQ9BSK4 669 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CFAP97Q9P2B7 532 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CRLS1Q9UJA2 301 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CCDC154A6NI56 674 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 INPPL1O15357 1258 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 FAM163BP0C2L3 166 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ITPKAP23677 461 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ZNF135P52742 658 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 LIPEQ05469 1076 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 IKBKEQ14164 716 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 USP41Q3LFD5 358 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 KIAA2013Q8IYS2 634 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 C2orf73Q8N5S3 287 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 TSSK3Q96PN8 268 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CORO1BQ9BR76 489 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CFAP54Q96N23 3096 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 PRSS51A0A1B0GVH4 220 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 OR6C75A6NL08 312 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 OR2AG2A6NM03 316 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 FXYD1O00168 92 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 RFPL2O75678 378 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 DIRAS1O95057 198 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 UGT2B4P06133 528 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 SMIM18P0DKX4 95 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 PBLDP30039 288 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 GSK3BP49841 420 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 YBEYP58557 167 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 PRKCQQ04759 706 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CHRNA6Q15825 494 aa12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 LRRC23Q53EV4 343 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CMTR2Q8IYT2 770 aaKnown RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 GABPB2Q8TAK5 448 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE1-209ENST00000552240 CCDC126Q96EE4 140 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms