RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SEMA4BQ9NPR2 832 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-208ENST00000551338 CD274Q9NZQ7 290 aa11.37□□□□□ -0.59
RAB5C-208ENST00000551338 DPP7Q9UHL4 492 aa11.37□□□□□ -0.59
RAB5C-208ENST00000551338 EIF2B4Q9UI10 523 aaKnown RBP11.37□□□□□ -0.59
RAB5C-208ENST00000551338 CDH22Q9UJ99 828 aa11.37□□□□□ -0.59
RAB5C-208ENST00000551338 ZNF225Q9UK10 706 aa11.37□□□□□ -0.59
RAB5C-208ENST00000551338 TMPRSS11EQ9UL52 423 aa11.37□□□□□ -0.59
RAB5C-208ENST00000551338 YBX2Q9Y2T7 364 aaKnown RBP11.37□□□□□ -0.59
RAB5C-208ENST00000551338 C15orf41Q9Y2V0 281 aa11.37□□□□□ -0.59
RAB5C-208ENST00000551338 PTGDR2Q9Y5Y4 395 aa11.37□□□□□ -0.59
RAB5C-208ENST00000551338 UPK3BL1B0FP48 263 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 UPK3BL2E5RIL1 263 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 UBDO15205 165 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 SLC25A14O95258 325 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 TRIM16O95361 564 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 ANP32DO95626 131 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 ASLP04424 464 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 CTSLP07711 333 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 SRPRAP08240 638 aaKnown RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 CYP2A6P11509 494 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 PRDX3P30048 256 aaKnown RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 VIPR1P32241 457 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 VIPR2P41587 438 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 RECQLP46063 649 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 SPINT3P49223 89 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 DGKGP49619 791 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 RGS4P49798 205 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 B4GALNT1Q00973 533 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 RALGDSQ12967 914 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 FASTKQ14296 549 aaKnown RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 PCBP2Q15366 365 aaKnown RBP eCLIP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 C18orf21Q32NC0 220 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 ATP13A5Q4VNC0 1218 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 SWT1Q5T5J6 900 aaKnown RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 GPRC6AQ5T6X5 926 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 ICE2Q659A1 982 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 BRAT1Q6PJG6 821 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 C16orf89Q6UX73 402 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 NPAS3Q8IXF0 933 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 PGAM4Q8N0Y7 254 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 MYO1HQ8N1T3 1032 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 CLDN19Q8N6F1 224 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 KIAA1958Q8N8K9 716 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 PDPRQ8NCN5 879 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 VN1R2Q8NFZ6 395 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 OR56A4Q8NGH8 313 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 ESAMQ96AP7 390 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 ULK4Q96C45 1275 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 LBHD1Q9BQE6 289 aaPredicted RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 FBRSL1Q9HCM7 1045 aaKnown RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 LATS2Q9NRM7 1088 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 DUS2Q9NX74 493 aaKnown RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 GIMAP2Q9UG22 337 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 PRPF19Q9UMS4 504 aaKnown RBP11.36□□□□□ -0.59
RAB5C-208ENST00000551338 BTRCQ9Y297 605 aa11.36□□□□□ -0.59
RAB5C-208ENST00000551338 ATP6AP2A0A1C7CYW4 349 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 E2F3O00716 465 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 SNX2O60749 519 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 LEFTY1O75610 366 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 ATP6AP2O75787 350 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 OR4F21O95013 312 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 PRR35P0CG20 571 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 TIMP2P16035 220 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 ZNF30P17039 623 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 DGKAP23743 735 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 NSG1P42857 185 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 CCNG1P51959 295 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 MTTPP55157 894 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 CDC16Q13042 620 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 CCNIQ14094 377 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 MAPRE2Q15555 327 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 XKR7Q5GH72 579 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 C1orf146Q5VVC0 180 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 TMC5Q6UXY8 1006 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 FRA10AC1Q70Z53 315 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 HSD11B1LQ7Z5J1 315 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 ETFBKMTQ8IXQ9 262 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAB5C-208ENST00000551338 DSELQ8IZU8 1212 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 KYQ8NBH2 561 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 STMN2Q93045 179 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 ZNF382Q96SR6 550 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 NPAS2Q99743 824 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 HGH1Q9BTY7 390 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 FAM126AQ9BYI3 521 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-208ENST00000551338 AKTIPQ9H8T0 292 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 ELOVL2Q9NXB9 296 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 UTP6Q9NYH9 597 aaKnown RBP11.35□□□□□ -0.59
RAB5C-208ENST00000551338 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 NFKBIL1Q9UBC1 381 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-208ENST00000551338 POLG2Q9UHN1 485 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 ADAMTS6Q9UKP5 1117 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 SLC27A6Q9Y2P4 619 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 OARD1Q9Y530 152 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 TIMM22Q9Y584 194 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 CKAP5Q14008 2032 aa11.35□□□□□ -0.59
RAB5C-208ENST00000551338 PSMD12O00232 456 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 FBP2O00757 339 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 RAD51BO15315 384 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms