RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 MSH3P20585 1137 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 PSMA4P25789 261 aaKnown RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 DRG2P55039 364 aaKnown RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 GLDNQ6ZMI3 551 aaPredicted RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 CPLX4Q7Z7G2 160 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 TSPAN33Q86UF1 283 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 C1orf52Q8N6N3 182 aaKnown RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 PCYOX1LQ8NBM8 494 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 NAXEQ8NCW5 288 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 ZNF473Q8WTR7 871 aaKnown RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 TMEM190Q8WZ59 177 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 ARHGEF2Q92974 986 aaKnown RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 PRMT6Q96LA8 375 aaPredicted RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 WDFY2Q96P53 400 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 ASCL2Q99929 193 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 APOBEC3GQ9HC16 384 aaKnown RBP4.29□□□□□ -1.72
GPN3-209ENST00000551079 SLC38A7Q9NVC3 462 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 CACNA1FO60840 1977 aa4.29□□□□□ -1.72
GPN3-209ENST00000551079 ARHGEF40Q8TER5 1519 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 A0A1B0GU03 582 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 H3BQ06 376 aaPredicted RBP4.28□□□□□ -1.72
GPN3-209ENST00000551079 PSMD14O00487 310 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 IGLV1-44P01699 117 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 CDH2P19022 906 aaPredicted RBP4.28□□□□□ -1.72
GPN3-209ENST00000551079 GNAZP19086 355 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 GALCP54803 685 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 RPS3AP61247 264 aaKnown RBP4.28□□□□□ -1.72
GPN3-209ENST00000551079 TSTQ16762 297 aaKnown RBP4.28□□□□□ -1.72
GPN3-209ENST00000551079 WDR20Q8TBZ3 569 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 KCNG4Q8TDN1 519 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 HCAR2Q8TDS4 363 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 TRPC4APQ8TEL6 797 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 TAF15Q92804 592 aaKnown RBP eCLIP4.28□□□□□ -1.72
GPN3-209ENST00000551079 NUDCD1Q96RS6 583 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 RAD21L1Q9H4I0 556 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 SMC4Q9NTJ3 1288 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 RCC2Q9P258 522 aaKnown RBP4.28□□□□□ -1.72
GPN3-209ENST00000551079 MTMR6Q9Y217 621 aa4.28□□□□□ -1.72
GPN3-209ENST00000551079 DUXAA6NLW8 204 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 SMAD9O15198 467 aaKnown RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 ZBTB43O43298 467 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 TMCC2O75069 709 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 GPC4O75487 556 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 TSHBP01222 138 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 IGHV4-38-2P0DP08 117 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 GNB3P16520 340 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 TMEM11P17152 192 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 HRH2P25021 359 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 HOXA13P31271 388 aaPredicted RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 KRT9P35527 623 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 MVPQ14764 893 aaKnown RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 NDUFAF5Q5TEU4 345 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 ZC2HC1BQ5TFG8 222 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 ZNF772Q68DY9 489 aaPredicted RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 FAM53AQ6NSI3 398 aaPredicted RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 NCEH1Q6PIU2 408 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 MMS22LQ6ZRQ5 1243 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 ZKSCAN4Q969J2 545 aaPredicted RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 PPM1MQ96MI6 270 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 SLX1AQ9BQ83 275 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 SLC26A6Q9BXS9 759 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 C2orf42Q9NWW7 574 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 TRMT1Q9NXH9 659 aaKnown RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 OGFRQ9NZT2 677 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 DBNLQ9UJU6 430 aaKnown RBP4.27□□□□□ -1.73
GPN3-209ENST00000551079 MMP24Q9Y5R2 645 aa4.27□□□□□ -1.73
GPN3-209ENST00000551079 PLPP2O43688 288 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 ZNF217O75362 1048 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 ACTN1P12814 892 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 ANXA7P20073 488 aaKnown RBP4.26□□□□□ -1.73
GPN3-209ENST00000551079 NFKBIAP25963 317 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 ACADLP28330 430 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 TAF6P49848 677 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 CD81P60033 236 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 G3BP1Q13283 466 aaKnown RBP eCLIP4.26□□□□□ -1.73
GPN3-209ENST00000551079 MED22Q15528 200 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 PCGF3Q3KNV8 242 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 ZSCAN23Q3MJ62 389 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 ACSM2BQ68CK6 577 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 TPRG1Q6ZUI0 275 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 PTOV1Q86YD1 416 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 TMTC2Q8N394 836 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 GSDMBQ8TAX9 411 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 SMPDL3BQ92485 455 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 C1orf74Q96LT6 269 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 C7orf26Q96N11 449 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 NCAPGQ9BPX3 1015 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 IRAK4Q9NWZ3 460 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 B3GALT5Q9Y2C3 310 aa4.26□□□□□ -1.73
GPN3-209ENST00000551079 A6NL46 340 aa4.25□□□□□ -1.73
GPN3-209ENST00000551079 NR5A2O00482 541 aa4.25□□□□□ -1.73
GPN3-209ENST00000551079 SYNCRIPO60506 623 aaKnown RBP4.25□□□□□ -1.73
GPN3-209ENST00000551079 TBX6O95947 436 aaPredicted RBP4.25□□□□□ -1.73
GPN3-209ENST00000551079 CD48P09326 243 aa4.25□□□□□ -1.73
GPN3-209ENST00000551079 PLA2G4BP0C869 781 aa4.25□□□□□ -1.73
GPN3-209ENST00000551079 KRT5P13647 590 aa4.25□□□□□ -1.73
GPN3-209ENST00000551079 MSH2P43246 934 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms