RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ERVW-1Q9UQF0 538 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 MFHAS1Q9Y4C4 1052 aa5.8□□□□□ -1.48
SCAF11-213ENST00000550629 PRSS38A1L453 326 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 TARSL2A2RTX5 802 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 C5orf60A6NFR6 353 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 H7C0C1 242 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 J3KR12 359 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 RNF103O00237 685 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 TRIM24O15164 1050 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF185O15231 689 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ALOX15BO15296 676 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 PHF2O75151 1096 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 GCATO75600 419 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 URI1O94763 535 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 FSBPO95073 299 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 GAS8O95995 478 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 GSRP00390 522 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 JUNP05412 331 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 CHRNB1P11230 501 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 SRCP12931 536 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 MMP13P45452 471 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ATP5OP48047 213 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 CSNK1DP48730 415 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 TUBB4BP68371 445 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ARF5P84085 180 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 AP1B1Q10567 949 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF234Q14588 700 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 PON2Q15165 354 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 OASLQ15646 514 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 HNRNPA1L2Q32P51 320 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 BROXQ5VW32 411 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 NAIF1Q69YI7 327 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 SDE2Q6IQ49 451 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 DARS2Q6PI48 645 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 FAM111BQ6SJ93 734 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 NPNTQ6UXI9 565 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 SERPINA13PQ6UXR4 307 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 DSG4Q86SJ6 1040 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF354CQ86Y25 554 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 SH2D3CQ8N5H7 860 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 PCDH20Q8N6Y1 951 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ATP11CQ8NB49 1132 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 PJA1Q8NG27 643 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 PPP1R14CQ8TAE6 165 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 CCHCR1Q8TD31 782 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 GRK7Q8WTQ7 553 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 HTR3CQ8WXA8 447 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 LRIG1Q96JA1 1093 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 MS4A14Q96JA4 679 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 CCDC114Q96M63 670 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 LGMNQ99538 433 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 IL12RB2Q99665 862 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 GABRG3Q99928 467 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 TMEM245Q9H330 911 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 TBC1D17Q9HA65 648 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 USP29Q9HBJ7 922 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 LTB4R2Q9NPC1 389 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 THAP10Q9P2Z0 257 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 SUN2Q9UH99 717 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 PCYOX1Q9UHG3 505 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 CA14Q9ULX7 337 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF148Q9UQR1 794 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 R3HDM2Q9Y2K5 976 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 MRFAP1Q9Y605 127 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 TICRRQ7Z2Z1 1910 aa5.79□□□□□ -1.48
SCAF11-213ENST00000550629 SPTBN5Q9NRC6 3674 aaKnown RBP5.79□□□□□ -1.48
SCAF11-213ENST00000550629 DOCK4Q8N1I0 1966 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 TRIOO75962 3097 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 EDDM13A0A1B0GTR0 161 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 WASH3PC4AMC7 463 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 KCNK1O00180 336 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SNAP91O60641 907 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 TMCC1O94876 653 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CD160O95971 181 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 MT-CO1P00395 513 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 EGFP01133 1207 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 C1SP09871 688 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 GAAP10253 952 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 NTSR1P30989 418 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 COILP38432 576 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 RECQLP46063 649 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CLCN5P51795 746 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 DGKEP52429 567 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 RHOAP61586 193 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 AP1S1P61966 158 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SNRPD1P62314 119 aaKnown RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 DGCR2P98153 550 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ZBTB16Q05516 673 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CD69Q07108 199 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SLC10A7Q0GE19 358 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 WASHC5Q12768 1159 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 DHX34Q14147 1143 aaKnown RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 FHL2Q14192 279 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ELAVL3Q14576 367 aaKnown RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF235Q14590 738 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 GRM3Q14832 879 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 STARD3Q14849 445 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 LLGL1Q15334 1064 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 DLG2Q15700 870 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 P3H1Q32P28 736 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms