RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CBX4O00257 560 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 ACSL4O60488 711 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SNAP29O95721 258 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 GSNP06396 782 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 LINC00271P0C7V0 271 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 CSF2RAP15509 400 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 CAPN3P20807 821 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 MAGP20916 626 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 ADSLP30566 484 aaPredicted RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SLC7A1P30825 629 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 GDF5P43026 501 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 CDK9P50750 372 aaKnown RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 CLCN2P51788 898 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 MTPNP58546 118 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SH3BP2P78314 561 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SERINC3Q13530 473 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 IHHQ14623 411 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 IMPG1Q17R60 797 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 ZRANB3Q5FWF4 1079 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SAMD4BQ5PRF9 694 aaKnown RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 HECTD3Q5T447 861 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 EPHX4Q8IUS5 362 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 ERI1Q8IV48 349 aaKnown RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 BPIFB6Q8NFQ5 453 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 FBXO30Q8TB52 745 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 TMEM169Q96HH4 297 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 MRGPRX2Q96LB1 330 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 PLEKHG4BQ96PX9 1271 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 TIMMDC1Q9NPL8 285 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 IGSF5Q9NSI5 407 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 ANKRD6Q9Y2G4 727 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 YIPF1Q9Y548 306 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 H3BNC9 293 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 BTN3A1O00481 513 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 COCHO43405 550 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 HSPA8P11142 646 aaKnown RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 CTPS1P17812 591 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 ARCN1P48444 511 aaKnown RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 KCNQ1P51787 676 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 NFYCQ13952 458 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 UGP2Q16851 508 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 NHSL2Q5HYW2 709 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 UGT3A1Q6NUS8 523 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 GALNT10Q86SR1 603 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 OR2T34Q8NGX1 318 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 OR2T3Q8NH03 318 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 GABPB2Q8TAK5 448 aaPredicted RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 C19orf60Q96EN9 201 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SLC25A23Q9BV35 468 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 KLF16Q9BXK1 252 aaPredicted RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 TM6SF2Q9BZW4 377 aa10.98□□□□□ -0.65
LINC00661-204ENST00000549354 SUCOQ9UBS9 1254 aaKnown RBP10.98□□□□□ -0.65
LINC00661-204ENST00000549354 C1orf232A0A0U1RR37 186 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 NOBOXO60393 691 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 PRKACGP22612 351 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 ELK4P28324 431 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 GKP32189 559 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 SQLEQ14534 574 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF235Q14590 738 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 POLD3Q15054 466 aaPredicted RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 AGAP9Q5VTM2 703 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 PAQR3Q6TCH7 311 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 KLHL23Q8NBE8 558 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF599Q96NL3 588 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 PDFQ9HBH1 243 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 VPS45Q9NRW7 570 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 TCAF1Q9Y4C2 921 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 TRIM24O15164 1050 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 ZSCAN9O15535 394 aaPredicted RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 CNPP09543 421 aaKnown RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 EEF1DP29692 281 aaKnown RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 SLC6A4P31645 630 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 PPM1AP35813 382 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 CSRP3P50461 194 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 RPS24P62847 133 aaKnown RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 HTRA4P83105 476 aaPredicted RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 CREMQ03060 361 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 BTG3Q14201 252 aaPredicted RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 AARS2Q5JTZ9 985 aaKnown RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 ALG1LQ6GMV1 187 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 CYHR1Q6ZMK1 362 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 PELI3Q8N2H9 469 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 TMEM199Q8N511 208 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 RDH11Q8TC12 318 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 TCF12Q99081 682 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 TRPM5Q9NZQ8 1165 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 MAP10Q9P2G4 905 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 TRIOO75962 3097 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 ASCC3Q8N3C0 2202 aaKnown RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 NPEPPSL1A6NEC2 478 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 PRAMEF11O60813 436 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 NIPSNAP2O75323 286 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 GJB5O95377 273 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 LATS1O95835 1130 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 GOT2P00505 430 aaKnown RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 MMP2P08253 660 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 LTA4HP09960 611 aaKnown RBP10.97□□□□□ -0.65
LINC00661-204ENST00000549354 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
LINC00661-204ENST00000549354 IL10P22301 178 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms