RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 PDZK1P1A8MUH7 402 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 ANKRD66B4E2M5 251 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 GPR89AB7ZAQ6 455 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 KRT86O43790 486 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 MFSD11O43934 449 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 NUAK1O60285 661 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 DIAPH2O60879 1101 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 UBXN7O94888 489 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 SLC25A14O95258 325 aaPredicted RBP8.34□□□□□ -1.07
TROAP-208ENST00000548817 EML2O95834 649 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 MBD3O95983 291 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 SERPINC1P01008 464 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 ANKRD34CP0C6C1 535 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 GPR89BP0CG08 455 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TCF4P15884 667 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 VCLP18206 1134 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 SEPHS1P49903 392 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TPM4P67936 248 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TYRO3Q06418 890 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 GALNT2Q10471 571 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 IL11RAQ14626 422 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 PAFAH1B3Q15102 231 aaKnown RBP8.34□□□□□ -1.07
TROAP-208ENST00000548817 PDK2Q15119 407 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 INSCQ1MX18 579 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 ANO6Q4KMQ2 910 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 CLEC17AQ6ZS10 378 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TMEM135Q86UB9 458 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 NIPA2Q8N8Q9 360 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 ST6GALNAC3Q8NDV1 305 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 MAML1Q92585 1016 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 FATE1Q969F0 183 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 ZDHHC12Q96GR4 267 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 BTBD6Q96KE9 485 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TGM7Q96PF1 710 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TSGA13Q96PP4 275 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 SMIM14Q96QK8 99 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 ZSCAN5AQ9BUG6 496 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TBC1D10AQ9BXI6 508 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 GPR87Q9BY21 358 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 ING2Q9H160 280 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 UCK1Q9HA47 277 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 TRIM39Q9HCM9 518 aa8.34□□□□□ -1.07
TROAP-208ENST00000548817 SIDT1Q9NXL6 827 aaKnown RBP8.34□□□□□ -1.07
TROAP-208ENST00000548817 CNOT6Q9ULM6 557 aaKnown RBP8.34□□□□□ -1.07
TROAP-208ENST00000548817 SSU72P8A0A1W2PR75 194 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 KMOO15229 486 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 TOX3O15405 576 aaPredicted RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 LRRTM2O43300 516 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 NDUFA10O95299 355 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 JCHAINP01591 159 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 SERPING1P05155 500 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 CD1EP15812 388 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 ZNF8P17098 575 aaPredicted RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 TYRP1P17643 537 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 XRCC1P18887 633 aaPredicted RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 IDSP22304 550 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 CD86P42081 329 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 TNNT3P45378 269 aaPredicted RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 ARL4DP49703 201 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 CCL11P51671 97 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 CLCNKAP51800 687 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 SLC25A11Q02978 314 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 MMRN1Q13201 1228 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 GTF2H3Q13889 308 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 DPYSL3Q14195 570 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 QPCTQ16769 361 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 ODF2Q5BJF6 829 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 HENMT1Q5T8I9 393 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 CACHD1Q5VU97 1274 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 CPZQ66K79 652 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 TXNRD3NBQ6F5E7 133 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 ALG1LQ6GMV1 187 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 CRTC3Q6UUV7 619 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 TMEM26Q6ZUK4 368 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 SYVN1Q86TM6 617 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 LRRTM4Q86VH4 590 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 RBM12BQ8IXT5 1001 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 MMP21Q8N119 569 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 RBMXL3Q8N7X1 1067 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 GALNT6Q8NCL4 622 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 GDAP1Q8TB36 358 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 ARRDC2Q8TBH0 407 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 NANOS1Q8WY41 292 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 ANP32BQ92688 251 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 CXorf40BQ96DE9 158 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 C19orf60Q96EN9 201 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 C9orf72Q96LT7 481 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 TTC25Q96NG3 672 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 PLEKHG4BQ96PX9 1271 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 OR6C1Q96RD1 312 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 LYSMD1Q96S90 227 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 SRPK1Q96SB4 655 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 BPIFA3Q9BQP9 254 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 ZNF670Q9BS34 389 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 MAK16Q9BXY0 300 aaKnown RBP8.33□□□□□ -1.08
TROAP-208ENST00000548817 GPR63Q9BZJ6 419 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 THAP2Q9H0W7 228 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 HSD3B7Q9H2F3 369 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 ZFYVE1Q9HBF4 777 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 PDE7BQ9NP56 450 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms