RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CPNE6O95741 557 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 HOXB3P14651 431 aaPredicted RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 ITGALP20701 1170 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 RBMS1P29558 406 aaKnown RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 HADHAP40939 763 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 FASLGP48023 281 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 VPS41P49754 854 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 BASP1P80723 227 aaKnown RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 CDH17Q12864 832 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 SEMA5AQ13591 1074 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 TBC1D25Q3MII6 688 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 SNAP47Q5SQN1 464 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 FAM83HQ6ZRV2 1179 aaPredicted RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 RAB11FIP2Q7L804 512 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 TAS2R42Q7RTR8 314 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 SLC9B2Q86UD5 537 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 PIM3Q86V86 326 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 PRELID2Q8N945 189 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 WDR36Q8NI36 951 aaKnown RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 DCUN1D1Q96GG9 259 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 AHCYL2Q96HN2 611 aaKnown RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 TMEM74Q96NL1 305 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 TBC1D10AQ9BXI6 508 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 STN1Q9H668 368 aaKnown RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 NLE1Q9NVX2 485 aaPredicted RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 WDR70Q9NW82 654 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 SMOXQ9NWM0 555 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 CPNE7Q9UBL6 633 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 PISDQ9UG56 409 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 CHD6Q8TD26 2715 aa15.52■□□□□ 0.07
DDX54-205ENST00000548786 KIF5CO60282 957 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 GAS8O95995 478 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 SLC2A4P14672 509 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 BRAFP15056 766 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 VCLP18206 1134 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 ITIH1P19827 911 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 IDSP22304 550 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 GPR3P46089 330 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 ARSDP51689 593 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 NFE2L1Q14494 772 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 NR1D2Q14995 579 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 ZNF574Q6ZN55 896 aaPredicted RBP15.51■□□□□ 0.07
DDX54-205ENST00000548786 SNX20Q7Z614 316 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 AMZ2Q86W34 360 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 JAMLQ86YT9 394 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 SLITRK4Q8IW52 837 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 NXPE1Q8N323 547 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 FBXO39Q8N4B4 442 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 DTX3LQ8TDB6 740 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 COG1Q8WTW3 980 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 JPH3Q8WXH2 748 aaPredicted RBP15.51■□□□□ 0.07
DDX54-205ENST00000548786 FGF11Q92914 225 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 CRELD1Q96HD1 420 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 PRR11Q96HE9 360 aaPredicted RBP15.51■□□□□ 0.07
DDX54-205ENST00000548786 CCDC74BQ96LY2 380 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 SARS2Q9NP81 518 aaKnown RBP15.51■□□□□ 0.07
DDX54-205ENST00000548786 ASCL3Q9NQ33 180 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 SLC2A6Q9UGQ3 507 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 TTC7AQ9ULT0 858 aaPredicted RBP15.51■□□□□ 0.07
DDX54-205ENST00000548786 WDR37Q9Y2I8 494 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 ZKSCAN5Q9Y2L8 839 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 LOXL2Q9Y4K0 774 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 URB1O60287 2271 aaKnown RBP15.51■□□□□ 0.07
DDX54-205ENST00000548786 ZFHX4Q86UP3 3567 aa15.51■□□□□ 0.07
DDX54-205ENST00000548786 KIR2DS5A0A0G2JLQ3 304 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 A0A0G2JNG1 304 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 IGHV5-10-1A0A0J9YXX1 117 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 ERI2A8K979 691 aaKnown RBP15.5■□□□□ 0.07
DDX54-205ENST00000548786 KIR2DS3K7RE56 304 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 PLD2O14939 933 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 ZW10O43264 779 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 SUN1O94901 812 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 VIPP01282 170 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 JMJD7P0C870 316 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 ITPKBP27987 946 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 CCKBRP32239 447 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 EIF2S3P41091 472 aaKnown RBP15.5■□□□□ 0.07
DDX54-205ENST00000548786 CLCNKAP51800 687 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 MAPK10P53779 464 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 SESN2P58004 480 aaPredicted RBP15.5■□□□□ 0.07
DDX54-205ENST00000548786 CRADDP78560 199 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 CFHR1Q03591 330 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 KIR2DS5Q14953 304 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 C16orf72Q14CZ0 275 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 TTC27Q6P3X3 843 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 DRICH1Q6PGQ1 229 aaPredicted RBP15.5■□□□□ 0.07
DDX54-205ENST00000548786 SERPINA9Q86WD7 417 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 OR10G6Q8NH81 332 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 NCSTNQ92542 709 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 ULK4Q96C45 1275 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 GRAMD1AQ96CP6 724 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 CXorf40BQ96DE9 158 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 LIN37Q96GY3 246 aaPredicted RBP15.5■□□□□ 0.07
DDX54-205ENST00000548786 PBKQ96KB5 322 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 COPS8Q99627 209 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 ZNF624Q9P2J8 865 aaPredicted RBP15.5■□□□□ 0.07
DDX54-205ENST00000548786 KLHL3Q9UH77 587 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 PYCARDQ9ULZ3 195 aa15.5■□□□□ 0.07
DDX54-205ENST00000548786 DRG1Q9Y295 367 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms