RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 YBEYP58557 167 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 CHRNB3Q05901 458 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 SERINC3Q13530 473 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 NR1D2Q14995 579 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 POLD3Q15054 466 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 RBBP7Q16576 425 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 RGS21Q2M5E4 152 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 ZIK1Q3SY52 487 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 ATP6AP1LQ52LC2 224 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 SLC2A7Q6PXP3 512 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 GPRIN3Q6ZVF9 776 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 SPARTQ8N0X7 666 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 CLEC4FQ8N1N0 589 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 DTWD1Q8N5C7 304 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 SLC15A4Q8N697 577 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 ATP6V0D2Q8N8Y2 350 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 FNDC5Q8NAU1 212 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 ITPKCQ96DU7 683 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 CCDC115Q96NT0 180 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 ZNF382Q96SR6 550 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 SGIP1Q9BQI5 828 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 FEM1AQ9BSK4 669 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 LHPPQ9H008 270 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 HEBP1Q9NRV9 189 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 FAM50BQ9Y247 325 aa9.78□□□□□ -0.84
SMARCD1-205ENST00000548573 MYO16Q9Y6X6 1858 aa9.77□□□□□ -0.84
SMARCD1-205ENST00000548573 DRGXA6NNA5 263 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 CDC7O00311 574 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 B4GAT1O43505 415 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 SYNCRIPO60506 623 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 ZNF623O75123 536 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 KATNA1O75449 491 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 SERPINB7O75635 380 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 RSL1D1O76021 490 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 NDST3O95803 873 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 POMCP01189 267 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 FUCA1P04066 466 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 TYMPP19971 482 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 CD9P21926 228 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 CES1P23141 567 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 FMO4P31512 558 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 SOX11P35716 441 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 MTHFRP42898 656 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 AGTR2P50052 363 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 PSMD7P51665 324 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 GSTM4Q03013 218 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 GALNT3Q14435 633 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 FAM110CQ1W6H9 321 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 ALG1LQ6GMV1 187 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 AFTPHQ6ULP2 937 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 R3HCC1LQ7Z5L2 792 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 STK32CQ86UX6 486 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 ZDHHC13Q8IUH4 622 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 OR8J3Q8NGG0 315 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 IGSF8Q969P0 613 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 SDCCAG3Q96C92 435 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 BTN2A3PQ96KV6 586 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 SUSD3Q96L08 255 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 UROC1Q96N76 676 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 GPR21Q99679 349 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 BEGAINQ9BUH8 593 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 UGT2B28Q9BY64 529 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 RAD21L1Q9H4I0 556 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 GORASP2Q9H8Y8 452 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 BLOC1S6Q9UL45 172 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 Q9Y3F1 56 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 CORINQ9Y5Q5 1042 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 V9GYQ6 96 aa9.77□□□□□ -0.85
SMARCD1-205ENST00000548573 GBF1Q92538 1859 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 CCL15-CCL14A0A0B4J2E2 113 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 NPEPPSL1A6NEC2 478 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 G3V2T6 193 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 BTN3A1O00481 513 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 E2F3O00716 465 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 PRAMEF11O60813 436 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 COQ9O75208 318 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 NDUFS3O75489 264 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 GMNNO75496 209 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 TCF3P15923 654 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 PSMA3P25788 255 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 ZNF140P52738 457 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 PLA2G16P53816 162 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 BEX3Q00994 111 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 TUSC3Q13454 348 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 TOP3AQ13472 1001 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 PWP1Q13610 501 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 ZNF235Q14590 738 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 CCL15Q16663 113 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 UGT3A1Q6NUS8 523 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 FBXL22Q6P050 247 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 GALNT18Q6P9A2 607 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 LINC00299Q6ZSB3 139 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 Q6ZSR9 355 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 USP50Q70EL3 339 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 RALGPS2Q86X27 583 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 PDZD8Q8NEN9 1154 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 BPIFB6Q8NFQ5 453 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 NLGN2Q8NFZ4 835 aa9.76□□□□□ -0.85
SMARCD1-205ENST00000548573 PJA1Q8NG27 643 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms