RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 RND1Q92730 232 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 TAAR8Q969N4 342 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 SLC29A3Q9BZD2 475 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 OSGEPL1Q9H4B0 414 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 PCDH9Q9HC56 1237 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.07□□□□□ -1.76
PTCH1-216ENST00000548379 PSD3Q9NYI0 1048 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 DNAJB4Q9UDY4 337 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 PLAGL1Q9UM63 463 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 PCDHA7Q9UN72 937 aa4.07□□□□□ -1.76
PTCH1-216ENST00000548379 WBP11Q9Y2W2 641 aaKnown RBP4.07□□□□□ -1.76
PTCH1-216ENST00000548379 COL22A1Q8NFW1 1626 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 NRXN3Q9Y4C0 1643 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 NRXN1Q9ULB1 1477 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 DISP2A7MBM2 1401 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 NINLQ9Y2I6 1382 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 LOC100509620A0A075B734 347 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 LOC102723996A0A087X1L8 192 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 IGLV5-52A0A0A0MRZ9 124 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 TMEM8BA6NDV4 472 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 LRRC72A6NJI9 287 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 CD8B2A6NJW9 211 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 A8MV72 311 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 FAM90A26D6RGX4 464 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 H3BNX3 289 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SPINT2O43291 252 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 GPC4O75487 556 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 GLUD1P00367 558 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 EGFP01133 1207 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 CRYABP02511 175 aaKnown RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 HOXC6P09630 235 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 UGT1A1P22309 533 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 C21orf33P30042 268 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 BDKRB2P30411 391 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 MSH2P43246 934 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 GLUD2P49448 558 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 BRWD1-AS2P59051 145 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SEC61BP60468 96 aaKnown RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 DSC1Q08554 894 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 TNFAIP1Q13829 316 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SETMARQ53H47 684 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 BMP2KLQ5H9B9 411 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 PAPPA-AS1Q5QFB9 102 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 DCST1Q5T197 706 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 DUS1LQ6P1R4 473 aaKnown RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 DSELQ8IZU8 1212 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 MINDY1Q8N5J2 469 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 PCDH20Q8N6Y1 951 aaKnown RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SYT2Q8N9I0 419 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SLC38A9Q8NBW4 561 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 OR2AK2Q8NG84 335 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 OR14A16Q8NHC5 309 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 HM13Q8TCT9 377 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 MAGEC3Q8TD91 643 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 FAM216AQ8WUB2 273 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 ASB5Q8WWX0 329 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 ZNF622Q969S3 477 aaKnown RBP eCLIP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 MOAP1Q96BY2 351 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 TXNDC15Q96J42 360 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 ABHD1Q96SE0 405 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 PAFAH2Q99487 392 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 KIFC3Q9BVG8 833 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SF3B5Q9BWJ5 86 aaKnown RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 TMEM39BQ9GZU3 492 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SIL1Q9H173 461 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 DENND2DQ9H6A0 471 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 NOX4Q9NPH5 578 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 HIF1ANQ9NWT6 349 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 ARHGEF38Q9NXL2 777 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 C1RLQ9NZP8 487 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 NFKBIL1Q9UBC1 381 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 PADI3Q9ULW8 664 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 MAGED1Q9Y5V3 778 aaPredicted RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 FAM169AQ9Y6X4 670 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.06□□□□□ -1.76
PTCH1-216ENST00000548379 LAMC1P11047 1609 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 GLI3P10071 1580 aa4.06□□□□□ -1.76
PTCH1-216ENST00000548379 EVPLQ92817 2033 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 PIK3C2GO75747 1445 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 KIAA0232Q92628 1395 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 ZNF541Q9H0D2 1346 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 FAM90A10PA6NDY2 464 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 SOCS6O14544 535 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 AVILO75366 819 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 OAZ2O95190 189 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 SRCP12931 536 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 RRM1P23921 792 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 STAT2P52630 851 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 FOXM1Q08050 763 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 CRYZQ08257 329 aaKnown RBP4.05□□□□□ -1.76
PTCH1-216ENST00000548379 MAD2L1Q13257 205 aaPredicted RBP4.05□□□□□ -1.76
PTCH1-216ENST00000548379 OASLQ15646 514 aaKnown RBP4.05□□□□□ -1.76
PTCH1-216ENST00000548379 DLG2Q15700 870 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 MYLK3Q32MK0 819 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 DAB2IPQ5VWQ8 1189 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 PAPD4Q6PIY7 484 aaKnown RBP4.05□□□□□ -1.76
PTCH1-216ENST00000548379 BRAT1Q6PJG6 821 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 SLC36A4Q6YBV0 504 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 KRBA2Q6ZNG9 492 aa4.05□□□□□ -1.76
PTCH1-216ENST00000548379 C9orf47Q6ZRZ4 202 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms