RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 C1orf21Q9H246 121 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 KIAA1522Q9P206 1035 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-209ENST00000547018 USP22Q9UPT9 525 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 DPPA5A6NC42 116 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 KERAO60938 352 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 CHEK2O96017 543 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 SRCP12931 536 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 DNAJB1P25685 340 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 DGKQP52824 942 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 PRMT2P55345 433 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 STX5Q13190 355 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 ATP13A5Q4VNC0 1218 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 SERPINA13PQ6UXR4 307 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 Q6ZVL8 140 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 TRIM74Q86UV6 250 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 IGFLR1Q9H665 355 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 SLC24A3Q9HC58 644 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 ITM2BQ9Y287 266 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 PRORSD1PA6NEY8 169 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 TTC34A8MYJ7 566 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 SLC2A4P14672 509 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 EFNA1P20827 205 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-209ENST00000547018 ITPKAP23677 461 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 NEK2P51955 445 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 DNAJB13P59910 316 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 MPPE1Q53F39 396 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 IL23RQ5VWK5 629 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 IYDQ6PHW0 289 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 KLHDC10Q6PID8 442 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 RNF175Q8N4F7 328 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 DCAF4L2Q8NA75 395 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 OR2AP1Q8NGE2 309 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 CNBD2Q96M20 576 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 IPPKQ9H8X2 491 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 CROTQ9UKG9 612 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 LRRC42Q9Y546 428 aa12.57□□□□□ -0.4
SCAF11-209ENST00000547018 TRBC1P01850 177 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 RHOP08100 348 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 MTHFD1P11586 935 aaKnown RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 CSRP3P50461 194 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 CACNG1Q06432 222 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 NFATC2Q13469 925 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 RNF220Q5VTB9 566 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 FAM91A1Q658Y4 838 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 LETMD1Q6P1Q0 360 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 GPRIN3Q6ZVF9 776 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 MYO1HQ8N1T3 1032 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 NKAPQ8N5F7 415 aaKnown RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 TADA1Q96BN2 335 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 PPM1MQ96MI6 270 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 ECSITQ9BQ95 431 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 INTS10Q9NVR2 710 aaKnown RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 APPL1Q9UKG1 709 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 MICAL3Q7RTP6 2002 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 SPTBN5Q9NRC6 3674 aaKnown RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 SYCE1LA8MT33 242 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 WASH3PC4AMC7 463 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 AKAP10O43572 662 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 TIPRLO75663 272 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 HMGCLP35914 325 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 WASP42768 502 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 POLD2P49005 469 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 NFYCQ13952 458 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 ARSIQ5FYB1 569 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 NECAB2Q7Z6G3 386 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 FUNDC1Q8IVP5 155 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 MIER2Q8N344 545 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 C2orf73Q8N5S3 287 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 MYCBPQ99417 103 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 SEPHS2Q99611 448 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 CCDC28BQ9BUN5 200 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 TFB2MQ9H5Q4 396 aaKnown RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 ARL15Q9NXU5 204 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 B4GALT6Q9UBX8 382 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 STK39Q9UEW8 545 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 COQ6Q9Y2Z9 468 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 SAC3D1A6NKF1 404 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 CTSAP10619 480 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 LBPP18428 481 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 CAPN3P20807 821 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 CCNG1P51959 295 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 SNRPD1P62314 119 aaKnown RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 XIAPP98170 497 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 ABRQ12979 859 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 SQLEQ14534 574 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 RFTN1Q14699 578 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 TCEAL5Q5H9L2 206 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 CAPRIN2Q6IMN6 1127 aaKnown RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 PGM2L1Q6PCE3 622 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 SPPL2CQ8IUH8 684 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 EME1Q96AY2 570 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 ZNF689Q96CS4 500 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-209ENST00000547018 ALG14Q96F25 216 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 DERL2Q9GZP9 239 aa12.56□□□□□ -0.4
SCAF11-209ENST00000547018 BRD9Q9H8M2 597 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms