RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 LSM3P62310 102 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 PPP2R2BQ00005 443 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 ILF2Q12905 390 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 PRKG2Q13237 762 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 XKR7Q5GH72 579 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 PRR23BQ6ZRT6 265 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 CYP2U1Q7Z449 544 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 RBM23Q86U06 439 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 SLC22A16Q86VW1 577 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 SVOPLQ8N434 492 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 PJA1Q8NG27 643 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 FBXO30Q8TB52 745 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 IMP4Q96G21 291 aaKnown RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 TSPAN18Q96SJ8 248 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 POPDC3Q9HBV1 291 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 NECTIN3Q9NQS3 549 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 PAK1IP1Q9NWT1 392 aaPredicted RBP14.06□□□□□ -0.16
SRP54-202ENST00000546080 USE1Q9NZ43 259 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 ATP11BQ9Y2G3 1177 aa14.06□□□□□ -0.16
SRP54-202ENST00000546080 LOC100130705A0A1B0GUX0 176 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 FAM92AA1XBS5 289 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 PAGE1O75459 146 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 DARSP14868 501 aaKnown RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 ALDH4A1P30038 563 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 PRDX3P30048 256 aaKnown RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 SERPINB1P30740 379 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 SUOXP51687 545 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 TIAL1Q01085 375 aaKnown RBP eCLIP14.05□□□□□ -0.166e-7■■■■□ 24.2
SRP54-202ENST00000546080 SELENBP1Q13228 472 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 RBBP7Q16576 425 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 ADPRMQ3LIE5 342 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 ATP6AP1LQ52LC2 224 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 LAIR2Q6ISS4 152 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 TAPT1Q6NXT6 567 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 SYVN1Q86TM6 617 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 HS3ST5Q8IZT8 346 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 AADATQ8N5Z0 425 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 DPP10Q8N608 796 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 OR6Q1Q8NGQ2 317 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 STAG3L4Q8TBR4 150 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 FAR1Q8WVX9 515 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 FIG4Q92562 907 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 RORBQ92753 470 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 OTUD5Q96G74 571 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 SMARCD1Q96GM5 515 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 TBATAQ96M53 351 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 CTRCQ99895 268 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 POLE4Q9NR33 117 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 C3orf18Q9UK00 162 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 PTCH2Q9Y6C5 1203 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 NYNRINQ9P2P1 1898 aaKnown RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 PAPPA2Q9BXP8 1791 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 GRXCR2A6NFK2 248 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 GSTA4O15217 222 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 HS6ST1O60243 411 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 RPS17P08708 135 aaKnown RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 IGFBP6P24592 240 aaPredicted RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 HTR7P34969 479 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 EMX1Q04741 257 aaPredicted RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 HIST2H2ACQ16777 129 aaPredicted RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 ZNF691Q5VV52 312 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 TMEM236Q5W0B7 351 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 MRNIPQ6NTE8 343 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 SPESP1Q6UW49 350 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 BEND5Q7L4P6 421 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 FAM86B1Q8N7N1 296 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 OR2T11Q8NH01 316 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 PROKR1Q8TCW9 393 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 C17orf50Q8WW18 174 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 KIAA1191Q96A73 305 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 SLC47A1Q96FL8 570 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 FCRL2Q96LA5 508 aaPredicted RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 SENP8Q96LD8 212 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 CGREF1Q99674 301 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 C17orf80Q9BSJ5 609 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 HGH1Q9BTY7 390 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 CARS2Q9HA77 564 aaKnown RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 EXD2Q9NVH0 621 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 RBPJLQ9UBG7 517 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 VPS51Q9UID3 782 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 POU2F3Q9UKI9 436 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
SRP54-202ENST00000546080 TIMM13Q9Y5L4 95 aaPredicted RBP14.05□□□□□ -0.16
SRP54-202ENST00000546080 MIA3Q5JRA6 1907 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 CD3EAPO15446 510 aaKnown RBP14.04□□□□□ -0.16
SRP54-202ENST00000546080 IRAK2O43187 625 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 GOT2P00505 430 aaKnown RBP14.04□□□□□ -0.16
SRP54-202ENST00000546080 CCDC159P0C7I6 412 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 LHX1P48742 406 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 ISL1P61371 349 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 VBP1P61758 197 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 LAPTM5Q13571 262 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 ACOX1Q15067 660 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 PCBP1Q15365 356 aaKnown RBP eCLIP14.04□□□□□ -0.168e-10■■□□□ 11.9
SRP54-202ENST00000546080 BRMS1LQ5PSV4 323 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 MANEALQ5VSG8 457 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 ANKRD34AQ69YU3 496 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 ENPP6Q6UWR7 440 aa14.04□□□□□ -0.16
SRP54-202ENST00000546080 DLEU7Q6UYE1 221 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms