RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	KIF26B	Q2KJY2	2108 aa		13.19	□□□□□ -0.3
POLE-222	ENST00000545015	CACNA1G	O43497	2377 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	TRBV23OR9-2	A0A075B6M9	112 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	TEX51	A0A1B0GUA7	166 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	ERI2	A8K979	691 aa	Known RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	LDB2	O43679	373 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	BUD23	O43709	281 aa	Known RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	LIAS	O43766	372 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	SNX2	O60749	519 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	SRP72	O76094	671 aa	Known RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	PRAMEF1	O95521	474 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	AP2A1	O95782	977 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	CCDC175	P0C221	793 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	HGF	P14210	728 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	IDS	P22304	550 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	HADHA	P40939	763 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	ETV5	P41161	510 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	SLC19A1	P41440	591 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	GDF10	P55107	478 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	TMPRSS3	P57727	454 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	NFATC2	Q13469	925 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	BCL7A	Q4VC05	210 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	NKAIN2	Q5VXU1	208 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	FOXR1	Q6PIV2	292 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	TMEM26	Q6ZUK4	368 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	TRAPPC5	Q8IUR0	188 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	LSM14A	Q8ND56	463 aa	Known RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	AGBL5	Q8NDL9	886 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	GDAP1	Q8TB36	358 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	HEXDC	Q8WVB3	486 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	ULK4	Q96C45	1275 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	LINC00615	Q96LM1	132 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	APOL2	Q9BQE5	337 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	TMEM121	Q9BTD3	319 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	OSGEPL1	Q9H4B0	414 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-222	ENST00000545015	PISD	Q9UG56	409 aa		13.18	□□□□□ -0.3
POLE-222	ENST00000545015	MN1	Q10571	1320 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	TRBV5-4	A0A0C4DH59	114 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015		B4E171	279 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	C9orf172	C9J069	976 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	GPR39	O43194	453 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	KLK10	O43240	276 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	POP7	O75817	140 aa	Known RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	C9	P02748	559 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	LIPC	P11150	499 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	ITIH1	P19827	911 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	TSPAN7	P41732	249 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	CTSC	P53634	463 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	CCZ1B	P86790	482 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	CCZ1	P86791	482 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	CLN3	Q13286	438 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	PTPRCAP	Q14761	206 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	RPS6KA1	Q15418	735 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	LONRF2	Q1L5Z9	754 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	GPR33	Q49SQ1	333 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	GPR155	Q7Z3F1	870 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	AMZ2	Q86W34	360 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	DTX1	Q86Y01	620 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	OR13C4	Q8NGS5	318 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	AHCYL2	Q96HN2	611 aa	Known RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	FCRL3	Q96P31	734 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	UBL7	Q96S82	380 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-222	ENST00000545015	ASB8	Q9H765	288 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	TMEM9	Q9P0T7	183 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	FKBPL	Q9UIM3	349 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	KCTD3	Q9Y597	815 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	BPTF	Q12830	3046 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	LOC400499	M0QZD8	3231 aa		13.17	□□□□□ -0.3
POLE-222	ENST00000545015	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.16	□□□□□ -0.3
POLE-222	ENST00000545015	IGSF10	Q6WRI0	2623 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	IGLV3-16	A0A075B6K0	115 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	TOX3	O15405	576 aa	Predicted RBP	13.16	□□□□□ -0.3
POLE-222	ENST00000545015	SGTA	O43765	313 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	SUN1	O94901	812 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	VIP	P01282	170 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	ANKRD34C	P0C6C1	535 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	FGF3	P11487	239 aa	Predicted RBP	13.16	□□□□□ -0.3
POLE-222	ENST00000545015	CCL4	P13236	92 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	MSH3	P20585	1137 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	CSTF2	P33240	577 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
POLE-222	ENST00000545015	FDFT1	P37268	417 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	SIX1	Q15475	284 aa	Predicted RBP	13.16	□□□□□ -0.3
POLE-222	ENST00000545015	PLA2G4E	Q3MJ16	856 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	TMEM164	Q5U3C3	297 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	METRNL	Q641Q3	311 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	TMEM220	Q6QAJ8	160 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	SNX20	Q7Z614	316 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	LINC00523	Q86TU6	105 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	ZNF761	Q86XN6	746 aa	Predicted RBP	13.16	□□□□□ -0.3
POLE-222	ENST00000545015	BMPER	Q8N8U9	685 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	RCBTB1	Q8NDN9	531 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	TRIM58	Q8NG06	486 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	ATG4A	Q8WYN0	398 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	USP7	Q93009	1102 aa		13.16	□□□□□ -0.3
POLE-222	ENST00000545015	NAF1	Q96HR8	494 aa	Known RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms