RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 EPB41L1Q9H4G0 881 aa16.66■□□□□ 0.26
HOXD8-204ENST00000544999 LRRC40Q9H9A6 602 aa16.66■□□□□ 0.26
HOXD8-204ENST00000544999 WASH6PQ9NQA3 447 aa16.66■□□□□ 0.26
HOXD8-204ENST00000544999 SCHIP1Q9P0W5 487 aaPredicted RBP16.66■□□□□ 0.26
HOXD8-204ENST00000544999 FKBPLQ9UIM3 349 aa16.66■□□□□ 0.26
HOXD8-204ENST00000544999 DNMT3AQ9Y6K1 912 aaPredicted RBP16.66■□□□□ 0.26
HOXD8-204ENST00000544999 CFAP47Q6ZTR5 3102 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 LILRA5A6NI73 299 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 PDZK1P1A8MUH7 402 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 SRP72O76094 671 aaKnown RBP16.65■□□□□ 0.26
HOXD8-204ENST00000544999 IDSP22304 550 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 STIP1P31948 543 aaKnown RBP16.65■□□□□ 0.26
HOXD8-204ENST00000544999 HADHAP40939 763 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 ETV5P41161 510 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 PPM1FP49593 454 aaPredicted RBP16.65■□□□□ 0.26
HOXD8-204ENST00000544999 ZNF140P52738 457 aaPredicted RBP16.65■□□□□ 0.26
HOXD8-204ENST00000544999 TMPRSS3P57727 454 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 DMPKQ09013 629 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 RPS6KA1Q15418 735 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 AGAP9Q5VTM2 703 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 WDR74Q6RFH5 385 aaPredicted RBP16.65■□□□□ 0.26
HOXD8-204ENST00000544999 RASGEF1AQ8N9B8 481 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 RCBTB1Q8NDN9 531 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 FCRL3Q96P31 734 aaPredicted RBP16.65■□□□□ 0.26
HOXD8-204ENST00000544999 ALS2CR12Q96Q35 445 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 ASB8Q9H765 288 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 POT1Q9NUX5 634 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.65■□□□□ 0.26
HOXD8-204ENST00000544999 TMEM9Q9P0T7 183 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 PDP2Q9P2J9 529 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 KCTD3Q9Y597 815 aa16.65■□□□□ 0.26
HOXD8-204ENST00000544999 AGRPO00253 132 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 LIASO43766 372 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 AP2A1O95782 977 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 VIPP01282 170 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 BRAFP15056 766 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 MSH3P20585 1137 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 AKT1P31749 480 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 SLC19A1P41440 591 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 CTSCP53634 463 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 MAPK10P53779 464 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 XIAPP98170 497 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 CLN3Q13286 438 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 OASLQ15646 514 aaKnown RBP16.64■□□□□ 0.25
HOXD8-204ENST00000544999 SEPT7Q16181 437 aaKnown RBP16.64■□□□□ 0.25
HOXD8-204ENST00000544999 TMEM220Q6QAJ8 160 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 TMEM26Q6ZUK4 368 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 GPR155Q7Z3F1 870 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 AMZ2Q86W34 360 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 TRIM48Q8IWZ4 208 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 AGBL5Q8NDL9 886 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 OR13C4Q8NGS5 318 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 ATG4AQ8WYN0 398 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 USP7Q93009 1102 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 ZNF514Q96K75 400 aaPredicted RBP16.64■□□□□ 0.25
HOXD8-204ENST00000544999 LZTFL1Q9NQ48 299 aa16.64■□□□□ 0.25
HOXD8-204ENST00000544999 ZNF624Q9P2J8 865 aaPredicted RBP16.64■□□□□ 0.25
HOXD8-204ENST00000544999 CELSR3Q9NYQ7 3312 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 PRAMEF33A0A0G2JMD5 474 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 OR2AG2A6NM03 316 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 AGAP14A8MT82 685 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 LDB2O43679 373 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 NRDCO43847 1150 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 PRAMEF10O60809 474 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 POP7O75817 140 aaKnown RBP16.63■□□□□ 0.25
HOXD8-204ENST00000544999 CCL4P13236 92 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 MPSTP25325 297 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 RPL10P27635 214 aaKnown RBP16.63■□□□□ 0.25
HOXD8-204ENST00000544999 CD82P27701 267 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 CSTF2P33240 577 aaKnown RBP eCLIP16.63■□□□□ 0.25
HOXD8-204ENST00000544999 CXADRP78310 365 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 CCZ1BP86790 482 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 CCZ1P86791 482 aaPredicted RBP16.63■□□□□ 0.25
HOXD8-204ENST00000544999 LONRF2Q1L5Z9 754 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 RBM12BQ8IXT5 1001 aaKnown RBP16.63■□□□□ 0.25
HOXD8-204ENST00000544999 NCSTNQ92542 709 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 ULK4Q96C45 1275 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 TBC1D10AQ9BXI6 508 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 CRLS1Q9UJA2 301 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 LAMA5O15230 3695 aa16.63■□□□□ 0.25
HOXD8-204ENST00000544999 PTPRQQ9UMZ3 2332 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 KLHL33A6NCF5 533 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 ERI2A8K979 691 aaKnown RBP16.62■□□□□ 0.25
HOXD8-204ENST00000544999 C9orf172C9J069 976 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 H7C0S8 307 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 LIPCP11150 499 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 ITGALP20701 1170 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 FDFT1P37268 417 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 HALP42357 657 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 MAPK9P45984 424 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 DRG2P55039 364 aaKnown RBP16.62■□□□□ 0.25
HOXD8-204ENST00000544999 TMPRSS15P98073 1019 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 CLCA4Q14CN2 919 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 TMEM164Q5U3C3 297 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 SNX20Q7Z614 316 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 LINC00523Q86TU6 105 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 HEXDCQ8WVB3 486 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 CXorf40BQ96DE9 158 aa16.62■□□□□ 0.25
HOXD8-204ENST00000544999 DNAJC1Q96KC8 554 aaKnown RBP16.62■□□□□ 0.25
HOXD8-204ENST00000544999 TAAR9Q96RI9 348 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms