RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PDE1BQ01064 536 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 TARDBPQ13148 414 aaKnown RBP eCLIP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 KLF1Q13351 362 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 BIRC2Q13490 618 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 LRP8Q14114 963 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PARP6Q2NL67 630 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 P3H1Q32P28 736 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PYCR3Q53H96 274 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ZNF569Q5MCW4 686 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ALS2CLQ60I27 953 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 KCTD16Q68DU8 428 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 GUSBP11Q6P575 273 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 OGFOD3Q6PK18 319 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 C20orf204Q6ZNR8 217 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ARHGEF18Q6ZSZ5 1173 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 MARK2Q7KZI7 788 aaKnown RBP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 GLT6D1Q7Z4J2 308 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 SLC13A5Q86YT5 568 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 GALNT13Q8IUC8 556 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 GPR26Q8NDV2 337 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 GPR156Q8NFN8 814 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 CCL4L1Q8NHW4 92 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 SLC35B2Q8TB61 432 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 CCDC110Q8TBZ0 833 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 BLOC1S5Q8TDH9 187 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 MAIP1Q8WWC4 291 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 GRAMD1AQ96CP6 724 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 EID2BQ96D98 161 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PLEKHG4BQ96PX9 1271 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 DEPDC7Q96QD5 511 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 OR2M4Q96R27 311 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 WDR24Q96S15 920 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 TMEM121Q9BTD3 319 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 FICDQ9BVA6 458 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 CARD9Q9H257 536 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 CCDC86Q9H6F5 360 aaKnown RBP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 TRIM39Q9HCM9 518 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 BPIFA1Q9NP55 256 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ZNHIT2Q9UHR6 403 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 FEZ2Q9UHY8 353 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PPP2R2CQ9Y2T4 447 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 PKP3Q9Y446 797 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 U3KQA8 63 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 RP1P56715 2156 aa7.3□□□□□ -1.24
CPSF7-224ENST00000544990 ASXL3Q9C0F0 2248 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 FADS2P1A8MWK0 482 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 B4DGG1 531 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 GPR89AB7ZAQ6 455 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 LINC01387J3KSC0 135 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 AURKAO14965 403 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 STX7O15400 261 aaKnown RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 ZSCAN12O43309 604 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 VEGFDO43915 354 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 NUAK1O60285 661 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 DNAJC6O75061 913 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 CRTAMO95727 393 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 FUCA1P04066 466 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 ATP1A1P05023 1023 aaKnown RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 GPR89BP0CG08 455 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 PNLIPP16233 465 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 BPIP17213 487 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 LPOP22079 712 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 AK4P27144 223 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 SPAM1P38567 509 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 ACTR1BP42025 376 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 CHRNA4P43681 627 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 ACTR1AP61163 376 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 GSTM4Q03013 218 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 C19orf57Q0VDD7 668 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 ITGA9Q13797 1035 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 SPIDRQ14159 915 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 TAF1AQ15573 450 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 C14orf28Q4W4Y0 310 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 SNAP47Q5SQN1 464 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 SLC30A9Q6PML9 568 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 RANBP10Q6VN20 620 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 RBM44Q6ZP01 1051 aaKnown RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 CHST15Q7LFX5 561 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 TRIM74Q86UV6 250 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 MARCH9Q86YJ5 346 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 PHYKPLQ8IUZ5 450 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 DCBLD1Q8N8Z6 715 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 FAM71DQ8N9W8 422 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 KYQ8NBH2 561 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 GDAP1Q8TB36 358 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 DTX3LQ8TDB6 740 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 BRSK1Q8TDC3 778 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 ZCCHC14Q8WYQ9 949 aaKnown RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 GLYATL1Q969I3 302 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 NXPE2Q96DL1 559 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 TTC25Q96NG3 672 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 VPS35Q96QK1 796 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 CCDC3Q9BQI4 270 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 TRIM56Q9BRZ2 755 aaKnown RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 NRSN2Q9GZP1 204 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 IL17CQ9P0M4 197 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 TAAR2Q9P1P5 351 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 LRIT1Q9P2V4 623 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 CNOT6Q9ULM6 557 aaKnown RBP7.29□□□□□ -1.24
CPSF7-224ENST00000544990 ZNF148Q9UQR1 794 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms