RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 UBA6A0AVT1 1052 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 GPR89AB7ZAQ6 455 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 GAPDHSO14556 408 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 KPNA5O15131 536 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 VEGFDO43915 354 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A9O60656 530 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 NDUFS2O75306 463 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 VPS26AO75436 327 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 AP2A2O94973 939 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 SLC25A14O95258 325 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 GSTM1P09488 218 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 OR56A5P0C7T3 313 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 GPR89BP0CG08 455 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 COL6A2P12110 1019 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 PKMP14618 531 aaKnown RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 STMN1P16949 149 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 MSH3P20585 1137 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 TYK2P29597 1187 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 AKT1P31749 480 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 AKT2P31751 481 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 KPNA2P52292 529 aaKnown RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 MPP1Q00013 466 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 GSTM4Q03013 218 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 GTF2H3Q13889 308 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 USP10Q14694 798 aaKnown RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 DBN1Q16643 649 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 ATP13A5Q4VNC0 1218 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 TAF1BQ53T94 588 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 TRIM61Q5EBN2 209 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 TNFAIP8L3Q5GJ75 292 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 MROH9Q5TGP6 573 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 PTRHD1Q6GMV3 140 aaKnown RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 TRABD2AQ86V40 505 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 FAM124AQ86V42 546 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 PIANPQ8IYJ0 282 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 CHCHD4Q8N4Q1 142 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 GPATCH11Q8N954 259 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 DDHD1Q8NEL9 900 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 CADM4Q8NFZ8 388 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 LPGAT1Q92604 370 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 SCAMP4Q969E2 229 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 ISL2Q96A47 359 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 TLCD1Q96CP7 247 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 ELMO2Q96JJ3 720 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 ZNF514Q96K75 400 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 PANX3Q96QZ0 392 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 CCDC86Q9H6F5 360 aaKnown RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A7Q9HAW7 530 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A10Q9HAW8 530 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A8Q9HAW9 530 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 SSU72Q9NP77 194 aaKnown RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 PHPT1Q9NRX4 125 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 WSB2Q9NYS7 404 aaPredicted RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 TAS2R13Q9NYV9 303 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 CD84Q9UIB8 345 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 TLK1Q9UKI8 766 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 NOVA2Q9UNW9 492 aaKnown RBP9.41□□□□□ -0.9
YBX3-215ENST00000544504 ANKRD6Q9Y2G4 727 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 VWA7Q9Y334 891 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 SPAG17Q6Q759 2223 aa9.41□□□□□ -0.9
YBX3-215ENST00000544504 PLXNA2O75051 1894 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 A0A087X1B8 175 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 KLHL33A6NCF5 533 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 FAM47DPA6NHR8 397 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 E5RI56 91 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 FPGTO14772 594 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 LATO43561 262 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 MAGEC1O60732 1142 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 PIAS1O75925 651 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 HAUS5O94927 633 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 SYF2O95926 243 aaKnown RBP9.4□□□□□ -0.9
YBX3-215ENST00000544504 GSTA1P08263 222 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 HOXC4P09017 264 aaPredicted RBP9.4□□□□□ -0.9
YBX3-215ENST00000544504 GM2AP17900 193 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A6P19224 532 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A1P22309 533 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A4P22310 534 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 HNRNPA2B1P22626 353 aaKnown RBP9.4□□□□□ -0.9
YBX3-215ENST00000544504 KELP23276 732 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 GABRB3P28472 473 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 ACSL1P33121 698 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A3P35503 534 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 UGT1A5P35504 534 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 SLC26A3P40879 764 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 CCT5P48643 541 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 RAB10P61026 200 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 C19orf57Q0VDD7 668 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 SEMA3AQ14563 771 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 SMAD1Q15797 465 aaKnown RBP9.4□□□□□ -0.9
YBX3-215ENST00000544504 GPRC6AQ5T6X5 926 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 SEL1L3Q68CR1 1132 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 KIAA0895LQ68EN5 471 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 PNCKQ6P2M8 343 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 CNSTQ6PJW8 725 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 MACC1Q6ZN28 852 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 SRRM1Q8IYB3 904 aaKnown RBP9.4□□□□□ -0.9
YBX3-215ENST00000544504 PIGKQ92643 395 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 KCNJ9Q92806 393 aa9.4□□□□□ -0.9
YBX3-215ENST00000544504 ARL8AQ96BM9 186 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms