RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ZNF148Q9UQR1 794 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 DNAJC16Q9Y2G8 782 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 PDZK1P1A8MUH7 402 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 RALBP11234 206 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 FDFT1P37268 417 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 ZNF140P52738 457 aaPredicted RBP22.89■■□□□ 1.25
CHFR-222ENST00000544093 DMPKQ09013 629 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 OLIG2Q13516 323 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 SPARCL1Q14515 664 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 TMEM71Q6P5X7 295 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 TMPRSS9Q7Z410 1059 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 C11orf96Q7Z7L8 435 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 TRIM48Q8IWZ4 208 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 SPACA3Q8IXA5 215 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 RBM12BQ8IXT5 1001 aaKnown RBP22.89■■□□□ 1.25
CHFR-222ENST00000544093 RASGEF1AQ8N9B8 481 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 POT1Q9NUX5 634 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 FKBPLQ9UIM3 349 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 ACSL6Q9UKU0 697 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 PPP2R2CQ9Y2T4 447 aa22.89■■□□□ 1.25
CHFR-222ENST00000544093 IGHV5-10-1A0A0J9YXX1 117 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 LILRA5A6NI73 299 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 AGAP14A8MT82 685 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 NVLO15381 856 aaKnown RBP22.88■■□□□ 1.25
CHFR-222ENST00000544093 LDB2O43679 373 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 GAS8O95995 478 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 VIPP01282 170 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 ITGALP20701 1170 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 HALP42357 657 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 PPM1FP49593 454 aaPredicted RBP22.88■■□□□ 1.25
CHFR-222ENST00000544093 UBE2IP63279 158 aaKnown RBP22.88■■□□□ 1.25
CHFR-222ENST00000544093 TLE3Q04726 772 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 LAMB3Q13751 1172 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 PTPRCAPQ14761 206 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 CCNG2Q16589 344 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 GPR33Q49SQ1 333 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 TMEM164Q5U3C3 297 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 SNX20Q7Z614 316 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 GRPEL1Q9HAV7 217 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 PISDQ9UG56 409 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 CRLS1Q9UJA2 301 aa22.88■■□□□ 1.25
CHFR-222ENST00000544093 THRAP10827 490 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 ITPKBP27987 946 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 NKAIN2Q5VXU1 208 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 DRICH1Q6PGQ1 229 aaPredicted RBP22.87■■□□□ 1.25
CHFR-222ENST00000544093 C4orf22Q6V702 233 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 ZNF574Q6ZN55 896 aaPredicted RBP22.87■■□□□ 1.25
CHFR-222ENST00000544093 PDZD3Q86UT5 571 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 CCDC89Q8N998 374 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 AGBL5Q8NDL9 886 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 OR13C4Q8NGS5 318 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 DCUN1D1Q96GG9 259 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 CCDC74BQ96LY2 380 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 PDP2Q9P2J9 529 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 SLC30A1Q9Y6M5 507 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 PTPRQQ9UMZ3 2332 aa22.87■■□□□ 1.25
CHFR-222ENST00000544093 PMS2P1A4D2B8 440 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 CFAP99D6REC4 459 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 E7EVH7 732 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 H7C0S8 307 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 GPR39O43194 453 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 POP7O75817 140 aaKnown RBP22.86■■□□□ 1.25
CHFR-222ENST00000544093 IFNB1P01574 187 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 CSF2RBP32927 897 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 CSTF2P33240 577 aaKnown RBP eCLIP22.86■■□□□ 1.25
CHFR-222ENST00000544093 XIAPP98170 497 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 CDH17Q12864 832 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 C16orf72Q14CZ0 275 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 TMEM220Q6QAJ8 160 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 ZNF761Q86XN6 746 aaPredicted RBP22.86■■□□□ 1.25
CHFR-222ENST00000544093 JAMLQ86YT9 394 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 BEND7Q8N7W2 519 aaPredicted RBP22.86■■□□□ 1.25
CHFR-222ENST00000544093 STYXQ8WUJ0 223 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 C1orf54Q8WWF1 131 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 HOMER3Q9NSC5 361 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.86■■□□□ 1.25
CHFR-222ENST00000544093 PAK5Q9P286 719 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 KCTD3Q9Y597 815 aa22.86■■□□□ 1.25
CHFR-222ENST00000544093 OR2AG2A6NM03 316 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 KLK10O43240 276 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 HGFP14210 728 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 HOXB3P14651 431 aaPredicted RBP22.85■■□□□ 1.25
CHFR-222ENST00000544093 CD82P27701 267 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 SLC5A2P31639 672 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 LMAN1P49257 510 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 TMPRSS3P57727 454 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 SEPT7Q16181 437 aaKnown RBP22.85■■□□□ 1.25
CHFR-222ENST00000544093 TMEM26Q6ZUK4 368 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 PLXDC1Q8IUK5 500 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 NXPE1Q8N323 547 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 CXorf40BQ96DE9 158 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 COPS8Q99627 209 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 TLR10Q9BXR5 811 aa22.85■■□□□ 1.25
CHFR-222ENST00000544093 NLE1Q9NVX2 485 aaPredicted RBP22.85■■□□□ 1.25
CHFR-222ENST00000544093 ZNF624Q9P2J8 865 aaPredicted RBP22.85■■□□□ 1.25
CHFR-222ENST00000544093 DRG1Q9Y295 367 aaKnown RBP22.85■■□□□ 1.25
CHFR-222ENST00000544093 GOLGA6L3A6NEY3 463 aa22.84■■□□□ 1.25
CHFR-222ENST00000544093 SUN1O94901 812 aa22.84■■□□□ 1.25
CHFR-222ENST00000544093 RPL10P27635 214 aaKnown RBP22.84■■□□□ 1.25
CHFR-222ENST00000544093 SLC19A1P41440 591 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms