RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 HOXC9P31274 260 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 MC5RP33032 325 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 ZP1P60852 638 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 PPARDQ03181 441 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 SREBF2Q12772 1141 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 GRIK2Q13002 908 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 ALCAMQ13740 583 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 SRSF7Q16629 238 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 PAPPA-AS1Q5QFB9 102 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 C6orf163Q5TEZ5 329 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 TEX38Q6PEX7 206 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 CACNA2D4Q7Z3S7 1137 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 GALNTL5Q7Z4T8 443 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 CCDC190Q86UF4 302 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 GUF1Q8N442 669 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 C16orf52Q8NHV5 167 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 RHBDF1Q96CC6 855 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 ZG16BQ96DA0 208 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 KRCC1Q9NPI7 259 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 CNGB3Q9NQW8 809 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 ZBTB40Q9NUA8 1239 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 PSD3Q9NYI0 1048 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 DNAJB4Q9UDY4 337 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 HACL1Q9UJ83 578 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 PCDHGA5Q9Y5G8 931 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 SQORQ9Y6N5 450 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 TOPAZ1Q8N9V7 1692 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 LOC100509620A0A075B734 347 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 TRBC2A0A5B9 178 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 SMAD9O15198 467 aaKnown RBP3.7□□□□□ -1.82
SCFD1-207ENST00000544052 PRLRP16471 622 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 NMBRP28336 390 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 ENTPD1P49961 510 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 PPATQ06203 517 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 ST3GAL1Q11201 340 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 KRT33BQ14525 404 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 MYLK3Q32MK0 819 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 HECTD3Q5T447 861 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 LDB1Q86U70 411 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-207ENST00000544052 ZC3HC1Q86WB0 502 aaKnown RBP3.7□□□□□ -1.82
SCFD1-207ENST00000544052 DSELQ8IZU8 1212 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 FBXO39Q8N4B4 442 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 ARFGAP1Q8N6T3 406 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 OR2AK2Q8NG84 335 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 GSDMBQ8TAX9 411 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 TEKT4Q8WW24 435 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 MOAP1Q96BY2 351 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 ORAI1Q96D31 301 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 KXD1Q9BQD3 176 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 MRPL1Q9BYD6 325 aaKnown RBP3.7□□□□□ -1.82
SCFD1-207ENST00000544052 RTN4RQ9BZR6 473 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 SPRY4Q9C004 299 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 SLCO5A1Q9H2Y9 848 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 ERVMER34-1Q9H9K5 563 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 PLAC1Q9HBJ0 212 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 HAO2Q9NYQ3 351 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 TAS2R14Q9NYV8 317 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 GDE1Q9NZC3 331 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 STK39Q9UEW8 545 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 ACSL5Q9ULC5 683 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 B3GALT5Q9Y2C3 310 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 CCL27Q9Y4X3 112 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 INSL5Q9Y5Q6 135 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 NWD2Q9ULI1 1742 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 AFF2P51816 1311 aa3.7□□□□□ -1.82
SCFD1-207ENST00000544052 PHRF1Q9P1Y6 1649 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 IGLV5-39A0A0G2JS06 123 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 A0A1B0GVT2 93 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 EIF4E1BA6NMX2 242 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 MAGEB17A8MXT2 336 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 CLGNO14967 610 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 NDUFS7O75251 213 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SLCO2B1O94956 709 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SOX30O94993 753 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 TPOP07202 933 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 NAGAP17050 411 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 BDKRB2P30411 391 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 APOBEC1P41238 236 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 MMP13P45452 471 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 ME1P48163 572 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 ZNF41P51814 821 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 CDH13P55290 713 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 DDR1Q08345 913 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 RABEP1Q15276 862 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 PRTGQ2VWP7 1150 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 FAM98BQ52LJ0 330 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 TMEM211Q6ICI0 200 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SHQ1Q6PI26 577 aaKnown RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 DLK2Q6UY11 383 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 CAMKMTQ7Z624 323 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 ADIPOR2Q86V24 386 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 MCEMP1Q8IX19 187 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 TC2NQ8N9U0 490 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 CFAP61Q8NHU2 1237 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 ZNF653Q96CK0 615 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 FER1L6-AS2Q96M78 137 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 SPATC1LQ9H0A9 340 aa3.69□□□□□ -1.82
SCFD1-207ENST00000544052 FOXP1Q9H334 677 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 DENND2DQ9H6A0 471 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-207ENST00000544052 OLAHQ9NV23 265 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms