RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ZNF284Q2VY69 593 aa19.57■□□□□ 0.72
COPS7A-218ENST00000543939 SLC9B1Q4ZJI4 515 aa19.57■□□□□ 0.72
COPS7A-218ENST00000543939 GPSM1Q86YR5 675 aa19.57■□□□□ 0.72
COPS7A-218ENST00000543939 PANX3Q96QZ0 392 aa19.57■□□□□ 0.72
COPS7A-218ENST00000543939 WRAP53Q9BUR4 548 aaKnown RBP19.57■□□□□ 0.72
COPS7A-218ENST00000543939 BRWD1Q9NSI6 2320 aa19.57■□□□□ 0.72
COPS7A-218ENST00000543939 STX16-NPEPL1H3BU86 382 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 STX16O14662 325 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 WNT9AO14904 365 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 MAGEC1O60732 1142 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 SIX3O95343 332 aaPredicted RBP19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CBX6O95503 412 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 OR56A5P0C7T3 313 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 TNFRSF4P43489 277 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 HK3P52790 923 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ACSBG2Q5FVE4 666 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 SH2D4BQ5SQS7 431 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ERN2Q76MJ5 926 aaKnown RBP19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CYP2U1Q7Z449 544 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CUZD1Q86UP6 607 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 SUGP1Q8IWZ8 645 aaKnown RBP19.56■□□□□ 0.72
COPS7A-218ENST00000543939 DDHD1Q8NEL9 900 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 DTD2Q96FN9 168 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 DYRK4Q9NR20 520 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ARL8BQ9NVJ2 186 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 KCTD5Q9NXV2 234 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ARMCX1Q9P291 453 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 MBD1Q9UIS9 605 aaPredicted RBP19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CAPN7Q9Y6W3 813 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 LRRC14BA6NHZ5 514 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CAPN14A8MX76 684 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 UBFD1O14562 309 aaKnown RBP19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ATP1B2P14415 290 aaPredicted RBP19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ALDH18A1P54886 795 aaKnown RBP19.56■□□□□ 0.72
COPS7A-218ENST00000543939 TMEM52BQ4KMG9 183 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ASRGL1Q7L266 308 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 ADAMTSL2Q86TH1 951 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CSGALNACT1Q8TDX6 532 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 BTN2A2Q8WVV5 523 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 AP2M1Q96CW1 435 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 VPS35Q96QK1 796 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 P2RY13Q9BPV8 354 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 TUBB6Q9BUF5 446 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CCDC106Q9BWC9 280 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 C1QTNF3Q9BXJ4 246 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 HDAC8Q9BY41 377 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 TNFRSF12AQ9NP84 129 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 CD207Q9UJ71 328 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 SORCS3Q9UPU3 1222 aa19.56■□□□□ 0.72
COPS7A-218ENST00000543939 TNRC18O15417 2968 aaPredicted RBP19.55■□□□□ 0.72
COPS7A-218ENST00000543939 COL4A2P08572 1712 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 TMEM233B4DJY2 109 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 K7EQS6 105 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 NPC1O15118 1278 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 EEF1DP29692 281 aaKnown RBP19.55■□□□□ 0.72
COPS7A-218ENST00000543939 AKT1P31749 480 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 PSMD8P48556 350 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 LRIT3Q3SXY7 679 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 TTLL9Q3SXZ7 439 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 TXNDC11Q6PKC3 985 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 SBSNQ6UWP8 590 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 CYHR1Q6ZMK1 362 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 MYO1HQ8N1T3 1032 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 EZH1Q92800 747 aaPredicted RBP19.55■□□□□ 0.72
COPS7A-218ENST00000543939 PTCD3Q96EY7 689 aaKnown RBP19.55■□□□□ 0.72
COPS7A-218ENST00000543939 DCUN1D1Q96GG9 259 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 FAR2Q96K12 515 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 ASB2Q96Q27 587 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 NUDT4Q9NZJ9 180 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 TRIM33Q9UPN9 1127 aa19.55■□□□□ 0.72
COPS7A-218ENST00000543939 TMEM265A0A087WTH1 108 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CFAP99D6REC4 459 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 RPS17P08708 135 aaKnown RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CBSLP0DN79 551 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CCR7P32248 378 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CBSP35520 551 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 WASP42768 502 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 KIR2DL1P43626 348 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CREB5Q02930 508 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CAMK2GQ13555 558 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 E2F5Q15329 346 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 TGFBIQ15582 683 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 AAK1Q2M2I8 961 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 KHDC1Q4VXA5 237 aaKnown RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 FAM46CQ5VWP2 391 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 ZNF765Q7L2R6 523 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 TREML1Q86YW5 311 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CHPFQ8IZ52 775 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 KIRREL3Q8IZU9 778 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 ZNF513Q8N8E2 541 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 RAB7BQ96AH8 199 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 KLHL29Q96CT2 875 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 NSL1Q96IY1 281 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 OR52B2Q96RD2 323 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 NUF2Q9BZD4 464 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 TCF7L2Q9NQB0 619 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CD274Q9NZQ7 290 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 NCF1BA6NI72 391 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 NCF1CA8MVU1 366 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 SGTAO43765 313 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms