RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 MAPK8P45983 427 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SMAD3P84022 425 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ECT2LQ008S8 904 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SREBF2Q12772 1141 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CAMK2GQ13555 558 aaPredicted RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 GTF2H2Q13888 395 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 RSBN1Q5VWQ0 802 aaPredicted RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 GTF2H2CQ6P1K8 395 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 XKR5Q6UX68 686 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ANKS3Q6ZW76 656 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SIDT2Q8NBJ9 832 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC13A3Q8WWT9 602 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ABCG8Q9H221 673 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 MRM3Q9HC36 420 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CCM2LQ9NUG4 571 aaPredicted RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TRNAU1APQ9NX07 287 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 NUDT4Q9NZJ9 180 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 FNIP2Q9P278 1114 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 A0A1W2PPW3 197 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 NT5C1B-RDH14C9J2C7 533 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 H0YJX3 145 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 H3BNH8 94 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ACSL4O60488 711 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TBL1XO60907 577 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UGT2B11O75310 529 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 NIPSNAP2O75323 286 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ECI2O75521 394 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CATP04040 527 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 PRKCGP05129 697 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CCDC159P0C7I6 412 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ALOX15P16050 662 aaPredicted RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UGT1A6P19224 532 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UGT1A1P22309 533 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UGT1A4P22310 534 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 PBLDP30039 288 aaPredicted RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CD68P34810 354 aaPredicted RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UGT1A3P35503 534 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UGT1A5P35504 534 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CRATP43155 626 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 KIR3DL1P43629 444 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 LEPRP48357 1165 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ENTPD1P49961 510 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CLCN2P51788 898 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 DIO3P55073 304 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 PFKPQ01813 784 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UBE3AQ05086 875 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 FOXM1Q08050 763 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 PLD1Q13393 1074 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 PPP4R4Q6NUP7 873 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 USP45Q70EL2 814 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC24A5Q71RS6 500 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ANKRD23Q86SG2 305 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC15A3Q8IY34 581 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 OR6K2Q8NGY2 324 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 MCFD2Q8NI22 146 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 APOLD1Q96LR9 279 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TMEM74Q96NL1 305 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CGREF1Q99674 301 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SMOC2Q9H3U7 446 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TUBA8Q9NY65 449 aaPredicted RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 DNAJB9Q9UBS3 223 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC25A13Q9UJS0 675 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 IKZF3Q9UKT9 509 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 COQ6Q9Y2Z9 468 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SCN7AQ01118 1682 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TCAF2A6NFQ2 919 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CDC7O00311 574 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 DUSP11O75319 330 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 RSL1D1O76021 490 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 URODP06132 367 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 GPC1P35052 558 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 MAGEA3P43357 314 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UFM1P61960 85 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 POLR2LP62875 67 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 PWP1Q13610 501 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 UGT2A3Q6UWM9 527 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 LINGO4Q6UY18 593 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 MYDGFQ969H8 173 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 KIAA1191Q96A73 305 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 FUBP3Q96I24 572 aaKnown RBP eCLIP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SPATA17Q96L03 361 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 B3GALT6Q96L58 329 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 NSMCE3Q96MG7 304 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 CDK15Q96Q40 435 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 KCNA7Q96RP8 456 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 AARSD1Q9BTE6 412 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ADAMTS10Q9H324 1103 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 ATP13A3Q9H7F0 1226 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 PCDH12Q9NPG4 1184 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SNX8Q9Y5X2 465 aa8.12□□□□□ -1.11
PRKAB1-207ENST00000542698 SMCHD1A6NHR9 2005 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 LCHNA4D1U4 455 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 EFCAB10A6NFE3 127 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 ZBTB42B2RXF5 422 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 H3BN98 237 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 NOBOXO60393 691 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CDK14O94921 469 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms