RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DHRS7Q9Y394 339 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 OR51B4Q9Y5P0 310 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 SCN8AQ9UQD0 1980 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 BRCA2P51587 3418 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 DHRS12A0PJE2 317 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 C7orf72A4D263 438 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 C2orf78A6NCI8 922 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 TSPAN3O60637 253 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SNAP91O60641 907 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SOD2P04179 222 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 TFAP2AP05549 437 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 IRF1P10914 325 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 CHRM3P20309 590 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 GRIA3P42263 894 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 DIO3P55073 304 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 EEFSECP57772 596 aaKnown RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 RHOAP61586 193 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PLD1Q13393 1074 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 RBBP7Q16576 425 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 EML3Q32P44 896 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 THEMIS2Q5TEJ8 643 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PPP4R4Q6NUP7 873 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 RNF165Q6ZSG1 346 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 C16orf59Q7L2K0 433 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 FAM217AQ8IXS0 508 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 TMEM199Q8N511 208 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 MFSD2AQ8NA29 543 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PDPRQ8NCN5 879 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 CANT1Q8WVQ1 401 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 WBP2Q969T9 261 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 TMEM125Q96AQ2 219 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 ALG14Q96F25 216 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 MYO19Q96H55 970 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 VCX3AQ9NNX9 186 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 HEBP1Q9NRV9 189 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 CD274Q9NZQ7 290 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 EIF2B4Q9UI10 523 aaKnown RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 LEF1Q9UJU2 399 aaPredicted RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 LZTS1Q9Y250 596 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SNX13Q9Y5W8 968 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SLC30A1Q9Y6M5 507 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SCN5AQ14524 2016 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 FAM234BA2RU67 622 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 ASPDHA6ND91 283 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 H0Y626 953 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 TBL1XO60907 577 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 AOC2O75106 756 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SLC22A3O75751 556 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 CSPG5O95196 566 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PGLSO95336 258 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 OLFM2O95897 454 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 FCGR1AP12314 374 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PSMA4P25789 261 aaKnown RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 MZF1P28698 734 aaPredicted RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PRDX3P30048 256 aaKnown RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 MAPK8P45983 427 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 POLE2P56282 527 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 NME5P56597 212 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 NFYCQ13952 458 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 TAF12Q16514 161 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 ARMC12Q5T9G4 340 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 KIAA1841Q6NSI8 718 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 BORAQ6PGQ7 559 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 LINGO4Q6UY18 593 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 Q6ZNB5 142 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SATL1Q86VE3 508 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 LSM14AQ8ND56 463 aaKnown RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PIH1D2Q8WWB5 315 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 LRCH3Q96II8 777 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 PLEKHG4BQ96PX9 1271 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 FEM1AQ9BSK4 669 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 HERC2P3Q9BVR0 1158 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 REPIN1Q9BWE0 567 aaKnown RBP6.47□□□□□ -1.37
PTPRO-208ENST00000542557 ANKRD60Q9BZ19 345 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 SEMA6AQ9H2E6 1030 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 BPIFA1Q9NP55 256 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 VPS51Q9UID3 782 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 TIMM22Q9Y584 194 aa6.47□□□□□ -1.37
PTPRO-208ENST00000542557 OBSL1O75147 1896 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 KANSL1LA0AUZ9 987 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 NCF1BA6NI72 391 aaPredicted RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 NCF1CA8MVU1 366 aaPredicted RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 IFRD1O00458 451 aaPredicted RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 ARPC2O15144 300 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 HTRA2O43464 458 aaPredicted RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 GREM1O60565 184 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 PGM3O95394 542 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 GLUD1P00367 558 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 NCF1P14598 390 aaPredicted RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF7P17097 686 aaPredicted RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 IL10P22301 178 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 CSNK1DP48730 415 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 POLR2JP52435 117 aaKnown RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 SMAD3P84022 425 aaKnown RBP6.46□□□□□ -1.37
PTPRO-208ENST00000542557 ECT2LQ008S8 904 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 TWF1Q12792 350 aa6.46□□□□□ -1.37
PTPRO-208ENST00000542557 DYNC1I2Q13409 638 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms