RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 BGNP21810 368 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 TCF15Q12870 199 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 SIM2Q14190 667 aaPredicted RBP27.47■■□□□ 1.99
CCM2-218ENST00000541586 ACOX1Q15067 660 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 KIAA0895LQ68EN5 471 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 NEK5Q6P3R8 708 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 LPCAT2Q7L5N7 544 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 NUDCD3Q8IVD9 361 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 NXPE1Q8N323 547 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 FAM136AQ96C01 138 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 UBXN10Q96LJ8 280 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 FAM83DQ9H4H8 585 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 IGSF5Q9NSI5 407 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 FGFR1OP2Q9NVK5 253 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 TAS2R13Q9NYV9 303 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 SIRPGQ9P1W8 387 aa27.47■■□□□ 1.99
CCM2-218ENST00000541586 PRMT5O14744 637 aaPredicted RBP27.46■■□□□ 1.99
CCM2-218ENST00000541586 SLC31A1O15431 190 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 TM7SF2O76062 418 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 ESR1P03372 595 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 CCDC166P0CW27 439 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 NEFHP12036 1026 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 GLRBP48167 497 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 DCDC1P59894 354 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 SGCGQ13326 291 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 CSHL1Q14406 222 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 TSNAXIP1Q2TAA8 658 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 KIAA1161Q6NSJ0 714 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 RBFAQ8N0V3 343 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 ZNF473Q8WTR7 871 aaKnown RBP27.46■■□□□ 1.99
CCM2-218ENST00000541586 HEXDCQ8WVB3 486 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 ANKRD49Q8WVL7 239 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 SCAMP4Q969E2 229 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 BIRC7Q96CA5 298 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 BOCQ9BWV1 1114 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 UNKQ9C0B0 810 aaKnown RBP27.46■■□□□ 1.99
CCM2-218ENST00000541586 COPG2Q9UBF2 871 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 GON4LQ3T8J9 2241 aa27.46■■□□□ 1.99
CCM2-218ENST00000541586 TRPM6Q9BX84 2022 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 ZNF7P17097 686 aaPredicted RBP27.45■■□□□ 1.99
CCM2-218ENST00000541586 ITGA9Q13797 1035 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 PCLAFQ15004 111 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 TECPR1Q7Z6L1 1165 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 TMEM151AQ8N4L1 468 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 CADM4Q8NFZ8 388 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 HSPA12BQ96MM6 686 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 SLC17A9Q9BYT1 436 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 RAD18Q9NS91 495 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 COMMD10Q9Y6G5 202 aa27.45■■□□□ 1.99
CCM2-218ENST00000541586 RGSL1A5PLK6 1076 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 PSMD11O00231 422 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 MAOBP27338 520 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 ALDH3A1P30838 453 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 SLC26A3P40879 764 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 PDAP1Q13442 181 aaKnown RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 LPAL2Q16609 132 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 FAM83EQ2M2I3 478 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 ZNF284Q2VY69 593 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 SETMARQ53H47 684 aaPredicted RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 LRRC8EQ6NSJ5 796 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 FSTL5Q8N475 847 aaPredicted RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 SCYL1Q96KG9 808 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 SPATA16Q9BXB7 569 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 CLPBQ9H078 707 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 SLCO1B3Q9NPD5 702 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 NFKBIL1Q9UBC1 381 aaPredicted RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 PCDHB1Q9Y5F3 818 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 METTL12A8MUP2 240 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 MEI4A8MW99 385 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 NIPSNAP2O75323 286 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 IGHV4-34P06331 123 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 APOA4P06727 396 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 LTA4HP09960 611 aaKnown RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 CPA3P15088 417 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 GM2AP17900 193 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 KCNA4P22459 653 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 RPS3P23396 243 aaKnown RBP eCLIP27.44■■□□□ 1.98
CCM2-218ENST00000541586 DHPSP49366 369 aaPredicted RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 PLK5Q496M5 336 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 ZC3H14Q6PJT7 736 aaKnown RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 FAM47EQ6ZV65 393 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 C11orf74Q86VG3 221 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 TRIM69Q86WT6 500 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 RGL4Q8IZJ4 473 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 MYOCQ99972 504 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 CDH19Q9H159 772 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 DUSP15Q9H1R2 295 aaPredicted RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 CPSF2Q9P2I0 782 aaKnown RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.44■■□□□ 1.98
CCM2-218ENST00000541586 DOCK9Q9BZ29 2069 aa27.44■■□□□ 1.98
CCM2-218ENST00000541586 G3V2L1 256 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 TK2O00142 265 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 LILRB5O75023 590 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 ZNF37AP17032 561 aaPredicted RBP27.43■■□□□ 1.98
CCM2-218ENST00000541586 CD9P21926 228 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 FGL2Q14314 439 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 TMEM259Q4ZIN3 620 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 HENMT1Q5T8I9 393 aaKnown RBP27.43■■□□□ 1.98
CCM2-218ENST00000541586 AGAP9Q5VTM2 703 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 TRIM42Q8IWZ5 723 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms