RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CARD9Q9H257 536 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 PCMTD2Q9NV79 361 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 PCDHGC3Q9UN70 934 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 MAPK8IP1Q9UQF2 711 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 MAP1AP78559 2803 aaPredicted RBP9.24□□□□□ -0.93
YBX3-211ENST00000541351 RNF212BA8MTL3 300 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 TRAFD1O14545 582 aaPredicted RBP9.24□□□□□ -0.93
YBX3-211ENST00000541351 RASAL1O95294 804 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 CPP00450 1065 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 ERBB2P04626 1255 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 CAPN1P07384 714 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 PYGMP11217 842 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 EPHB2P29323 1055 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 SLC19A1P41440 591 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 SCNN1BP51168 640 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 MFAP5Q13361 173 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 GPR18Q14330 331 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 INSCQ1MX18 579 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 ZCWPW2Q504Y3 356 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 MLIPQ5VWP3 458 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 PLEKHA7Q6IQ23 1121 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 SHC4Q6S5L8 630 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 KRBA2Q6ZNG9 492 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 B4GALNT4Q76KP1 1039 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 HSD11B1LQ7Z5J1 315 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 GPR135Q8IZ08 494 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 KAT5Q92993 513 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 COX14Q96I36 57 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 MAP3K3Q99759 626 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 SLC40A1Q9NP59 571 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 KLC4Q9NSK0 619 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 GPATCH2LQ9NWQ4 482 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
YBX3-211ENST00000541351 MEMO1Q9Y316 297 aa9.24□□□□□ -0.93
YBX3-211ENST00000541351 CCDC66A2RUB6 948 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 ARHGAP42A6NI28 874 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 WASH4PA8MWX3 477 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 E7EQ34 232 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 KLF7O75840 302 aaPredicted RBP9.23□□□□□ -0.93
YBX3-211ENST00000541351 MSL3P1P0C860 447 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 TFE3P19532 575 aaPredicted RBP9.23□□□□□ -0.93
YBX3-211ENST00000541351 UGT1A4P22310 534 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 HSPA9P38646 679 aaKnown RBP9.23□□□□□ -0.93
YBX3-211ENST00000541351 GPR19Q15760 415 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 KRTCAP3Q53RY4 240 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 FAM69BQ5VUD6 431 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 FAM173BQ6P4H8 233 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 ARCQ7LC44 396 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 PHLDB2Q86SQ0 1253 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 TRIM74Q86UV6 250 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 OOSP2Q86WS3 158 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 GRAMD1CQ8IYS0 662 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 BBS5Q8N3I7 341 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 TTC30BQ8N4P2 665 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 TAB3Q8N5C8 712 aaPredicted RBP9.23□□□□□ -0.93
YBX3-211ENST00000541351 DNAAF3Q8N9W5 541 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 NETO2Q8NC67 525 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 MYRIPQ8NFW9 859 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 FNIP1Q8TF40 1166 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 ASB5Q8WWX0 329 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 SDCCAG3Q96C92 435 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 C18orf8Q96DM3 657 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 MBD6Q96DN6 1003 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 SCRN2Q96FV2 425 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 AP1M1Q9BXS5 423 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 PDCL3Q9H2J4 239 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 PRKAB1Q9Y478 270 aa9.23□□□□□ -0.93
YBX3-211ENST00000541351 ZNF469Q96JG9 3925 aaPredicted RBP9.23□□□□□ -0.93
YBX3-211ENST00000541351 NCOA6Q14686 2063 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 FGF10O15520 208 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 NUAK1O60285 661 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PRAMEF2O60811 474 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PRAMEF11O60813 436 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 SOD1P00441 154 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 UQCRHP07919 91 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PRKCSHP14314 528 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 IGFBP2P18065 325 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 ITGAXP20702 1163 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PCSK6P29122 969 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 SPAM1P38567 509 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 USP8P40818 1118 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 ME1P48163 572 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PRKAA1Q13131 559 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 C3AR1Q16581 482 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PTCHD3Q3KNS1 767 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PTPN20Q4JDL3 420 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 ARTNQ5T4W7 220 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 LCN10Q6JVE6 187 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 ABRAXAS1Q6UWZ7 409 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 WASH2PQ6VEQ5 465 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 PASD1Q8IV76 773 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 CLYBLQ8N0X4 340 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 UMODL1-AS1Q8N2C9 162 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 TMEM35BQ8NCS4 154 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 SIMC1Q8NDZ2 872 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 GOT1L1Q8NHS2 421 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 PROKR1Q8TCW9 393 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms