RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PCDHGA1Q9Y5H4 931 aa18.51■□□□□ 0.55
VPS33A-205ENST00000541169 TRIM38O00635 465 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 TP73O15350 636 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 MTX2O75431 263 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 KCNK5O95279 499 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 FTH1P02794 183 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 GP1BAP07359 652 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 ARCN1P48444 511 aaKnown RBP18.5■□□□□ 0.55
VPS33A-205ENST00000541169 PRLHRP49683 370 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 PLOD1Q02809 727 aaPredicted RBP18.5■□□□□ 0.55
VPS33A-205ENST00000541169 DHX9Q08211 1270 aaKnown RBP18.5■□□□□ 0.55
VPS33A-205ENST00000541169 THOC5Q13769 683 aaKnown RBP18.5■□□□□ 0.55
VPS33A-205ENST00000541169 NR0B2Q15466 257 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 DBN1Q16643 649 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 KHDC1Q4VXA5 237 aaKnown RBP18.5■□□□□ 0.55
VPS33A-205ENST00000541169 PSAPL1Q6NUJ1 521 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 TMEM220Q6QAJ8 160 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 WASH2PQ6VEQ5 465 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 PIANPQ8IYJ0 282 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 DEFB124Q8NES8 71 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 ZNF669Q96BR6 464 aaPredicted RBP18.5■□□□□ 0.55
VPS33A-205ENST00000541169 APOLD1Q96LR9 279 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 FAM167BQ9BTA0 163 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 DPEP2Q9H4A9 486 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 WASH6PQ9NQA3 447 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 GRHL1Q9NZI5 618 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 ZC3H7BQ9UGR2 993 aaKnown RBP18.5■□□□□ 0.55
VPS33A-205ENST00000541169 TEX264Q9Y6I9 313 aa18.5■□□□□ 0.55
VPS33A-205ENST00000541169 CEP250Q9BV73 2442 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 ZCWPW2A0A1B0GU75 182 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 MGAT4DA6NG13 374 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 OR56A5P0C7T3 313 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 ACP5P13686 325 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 IDSP22304 550 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 ACP1P24666 158 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 ADARP55265 1226 aaKnown RBP18.49■□□□□ 0.55
VPS33A-205ENST00000541169 DAB2P98082 770 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 KCTD16Q68DU8 428 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 NEPROQ6NW34 567 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 NRROSQ86YC3 692 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 ZNF547Q8IVP9 402 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 OR2L2Q8NH16 312 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 CARD6Q9BX69 1037 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 FAM96AQ9H5X1 160 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 ARFGAP3Q9NP61 516 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 INTS10Q9NVR2 710 aaKnown RBP18.49■□□□□ 0.55
VPS33A-205ENST00000541169 MTRF1LQ9UGC7 380 aaKnown RBP18.49■□□□□ 0.55
VPS33A-205ENST00000541169 ACSL5Q9ULC5 683 aa18.49■□□□□ 0.55
VPS33A-205ENST00000541169 KIR2DS5A0A0G2JLQ3 304 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 A0A0G2JNG1 304 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 OR2AG2A6NM03 316 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 H3BMM5 538 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 KIR2DS3K7RE56 304 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 GPR39O43194 453 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 NDUFS3O75489 264 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 POP7O75817 140 aaKnown RBP18.48■□□□□ 0.55
VPS33A-205ENST00000541169 TRIM16O95361 564 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 GSTA2P09210 222 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 PNLIPP16233 465 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 ARNTP27540 789 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 ELK3P41970 407 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 PLTPP55058 493 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 E2F1Q01094 437 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 GUCY2DQ02846 1103 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 PDIA2Q13087 525 aaKnown RBP18.48■□□□□ 0.55
VPS33A-205ENST00000541169 CRYMQ14894 314 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 KIR2DS5Q14953 304 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 KCTD19Q17RG1 926 aaPredicted RBP18.48■□□□□ 0.55
VPS33A-205ENST00000541169 TYSND1Q2T9J0 566 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 ZNF648Q5T619 568 aaPredicted RBP18.48■□□□□ 0.55
VPS33A-205ENST00000541169 AGAP9Q5VTM2 703 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 SLC30A9Q6PML9 568 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 CRTC3Q6UUV7 619 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 C11orf96Q7Z7L8 435 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 OTUD6BQ8N6M0 293 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 GPR156Q8NFN8 814 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 WDR48Q8TAF3 677 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 ZDHHC1Q8WTX9 485 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 SGF29Q96ES7 293 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 CCM2Q9BSQ5 444 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 STN1Q9H668 368 aaKnown RBP18.48■□□□□ 0.55
VPS33A-205ENST00000541169 KLC4Q9NSK0 619 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 PCDHB1Q9Y5F3 818 aa18.48■□□□□ 0.55
VPS33A-205ENST00000541169 EME2A4GXA9 379 aaPredicted RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 OR51F1A6NGY5 319 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 PRMT5O14744 637 aaPredicted RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 KPNA5O15131 536 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 NUDT21O43809 227 aaKnown RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 F3P13726 295 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 GLB1P16278 677 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 RPS3P23396 243 aaKnown RBP eCLIP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 CDKN1CP49918 316 aaPredicted RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 B4GALNT1Q00973 533 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 RPA4Q13156 261 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 CUL1Q13616 776 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 MSS51Q4VC12 460 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 C14orf28Q4W4Y0 310 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 STEAP4Q687X5 459 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 KIAA0408Q6ZU52 694 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 CYS1Q717R9 158 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms