RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MS4A13Q5J8X5 152 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 TXNDC11Q6PKC3 985 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 Q6ZSR9 355 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 TMEM199Q8N511 208 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 PACRGLQ8N7B6 248 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZC3H15Q8WU90 426 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 BEGAINQ9BUH8 593 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ABHD16BQ9H3Z7 469 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ACTL8Q9H568 366 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC6A13Q9NSD5 602 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 FARSBQ9NSD9 589 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 CATSPERZQ9NTU4 200 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 TUBA8Q9NY65 449 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 VAPAQ9P0L0 249 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 VPS4AQ9UN37 437 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 PTCH2Q9Y6C5 1203 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 A0A0C4DFX4 3053 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 NOL3O60936 208 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 PAPSS2O95340 614 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 GUCA1CO95843 209 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ALPLP05186 524 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 MBL2P11226 248 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 MAP2K4P45985 399 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ATP4BP51164 291 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 RENBPP51606 427 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ARPP19P56211 112 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ERVPABLB-1P60509 514 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 GALNT1Q10472 559 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 RFTN2Q52LD8 501 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 C6orf136Q5SQH8 315 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 SMYD5Q6GMV2 418 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 OVOS1Q6IE37 1185 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 PSAPL1Q6NUJ1 521 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 FBXL22Q6P050 247 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF773Q6PK81 442 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 CD300LGQ6UXG3 332 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 DSG4Q86SJ6 1040 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 SPARTQ8N0X7 666 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 SFRP1Q8N474 314 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 EFHBQ8N7U6 833 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ABHD11Q8NFV4 315 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 OR4L1Q8NH43 312 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 OR10A6Q8NH74 314 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ITFG1Q8TB96 612 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 STON2Q8WXE9 905 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 MIR1-1HGQ9H1L0 117 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZFP14Q9HCL3 533 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 INTS10Q9NVR2 710 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 GMIPQ9P107 970 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 PTBP2Q9UKA9 531 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 UNC80Q8N2C7 3258 aa10.25□□□□□ -0.77
CDC42SE1-207ENST00000540998 TMEM221A6NGB7 291 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 FGF10O15520 208 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 BCAS1O75363 584 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 DIRAS1O95057 198 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 GSNP06396 782 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 THRBP10828 461 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 MAGP20916 626 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CRHBPP24387 322 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 DNAJB2P25686 324 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 PCSK1P29120 753 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 HALP42357 657 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 GDF5P43026 501 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 GSSP48637 474 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 EIF2B2P49770 351 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CRYBB1P53674 252 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 GSTM4Q03013 218 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SPIDRQ14159 915 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 AFMIDQ63HM1 303 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 ANKS6Q68DC2 871 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 TIGD7Q6NT04 549 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC22A15Q8IZD6 547 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 PDPRQ8NCN5 879 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 NDNFQ8TB73 568 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZFP90Q8TF47 636 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 RPRD1AQ96P16 312 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 MBOAT4Q96T53 435 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 C17orf80Q9BSJ5 609 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 AARSD1Q9BTE6 412 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SMOC2Q9H3U7 446 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 RGS17Q9UGC6 210 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 LIMD1Q9UGP4 676 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 DAPK2Q9UIK4 370 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 PNMA8BQ9ULN7 279 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 NEUROG3Q9Y4Z2 214 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCL15-CCL14A0A0B4J2E2 113 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 AGRPO00253 132 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SNAP91O60641 907 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 MATN4O95460 622 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CAPN1P07384 714 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 FGF4P08620 206 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CDH3P22223 829 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 DNAJB1P25685 340 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 HOXC13P31276 330 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 HMGCS1Q01581 520 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CD47Q08722 323 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 FOXD4Q12950 439 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 KCNAB2Q13303 367 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCL15Q16663 113 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms