RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PALM2Q8IXS6 379 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 KLHDC8BQ8IXV7 354 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 FSTL5Q8N475 847 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 PLA2G15Q8NCC3 412 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 GPR26Q8NDV2 337 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 GSDMBQ8TAX9 411 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 CPT1BQ92523 772 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 TCEAL3Q969E4 200 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 FUBP1Q96AE4 644 aaKnown RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 VOPP1Q96AW1 172 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 LRRC39Q96DD0 335 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 ZNF514Q96K75 400 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 VPS35Q96QK1 796 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 SMIM14Q96QK8 99 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 RANBP9Q96S59 729 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 COPS8Q99627 209 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 GORASP1Q9BQQ3 440 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 DUSP23Q9BVJ7 150 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 TEX101Q9BY14 249 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 GSDMCQ9BYG8 508 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 DPH5Q9H2P9 285 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 SUDS3Q9H7L9 328 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 CARS2Q9HA77 564 aaKnown RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 TRIM39Q9HCM9 518 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 CYP4F12Q9HCS2 524 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 IL26Q9NPH9 171 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 PPANQ9NQ55 473 aaKnown RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 FAM114A2Q9NRY5 505 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 NLE1Q9NVX2 485 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 NCKIPSDQ9NZQ3 722 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 WHRNQ9P202 907 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 VPS18Q9P253 973 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 NFKBIL1Q9UBC1 381 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 APOBEC3BQ9UH17 382 aaKnown RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 RIMKLBQ9ULI2 386 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 SOX13Q9UN79 622 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 SNX24Q9Y343 169 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 NEU2Q9Y3R4 380 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 TCAF1Q9Y4C2 921 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.41□□□□□ -1.38
SNHG1-212ENST00000539975 FAM169AQ9Y6X4 670 aa6.41□□□□□ -1.38
SNHG1-212ENST00000539975 ZDBF2Q9HCK1 2354 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 A0A0U1RQS6 177 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 A0A1B0GTQ1 180 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PRSS38A1L453 326 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CCDC78A2IDD5 438 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 KLHL33A6NCF5 533 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 K7ESM1 405 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 KMOO15229 486 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 FLRT2O43155 660 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 AQP9O43315 295 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 RAD51CO43502 376 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 LDB2O43679 373 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PCDHGA12O60330 932 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 NDUFS3O75489 264 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 SEC31AO94979 1220 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 WNT1P04628 370 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 SLC2A4P14672 509 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 NME1P15531 152 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 EPHA1P21709 976 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 MAGEA6P43360 314 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 GNPDA1P46926 289 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 RXRGP48443 463 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PPM1FP49593 454 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TTPAP49638 278 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 ARL4DP49703 201 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 DUSP3P51452 185 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 HK3P52790 923 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 ITGA8P53708 1063 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 DRG2P55039 364 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PLTPP55058 493 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 GUCY2DQ02846 1103 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TMEM115Q12893 351 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 NFATC2Q13469 925 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 OLIG2Q13516 323 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 LRP8Q14114 963 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 FZD2Q14332 565 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 HLTFQ14527 1009 aaKnown RBP eCLIP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 KCNJ11Q14654 390 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CHRNA6Q15825 494 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 INSCQ1MX18 579 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 ZNF423Q2M1K9 1284 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 BBS9Q3SYG4 887 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 ZNF542PQ5EBM4 170 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PRAMEF14Q5SWL7 426 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 RNASEH2BQ5TBB1 312 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 MARK2Q7KZI7 788 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TAF8Q7Z7C8 310 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TRAPPC5Q8IUR0 188 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 IFT20Q8IY31 132 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PHACTR4Q8IZ21 702 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TTC30BQ8N4P2 665 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 MMGT1Q8N4V1 131 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 NAT8LQ8N9F0 302 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 OR13C4Q8NGS5 318 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 OR4L1Q8NH43 312 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CALML6Q8TD86 181 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 LMX1AQ8TE12 382 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PYROXD1Q8WU10 500 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 WFDC12Q8WWY7 111 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms