RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RPL10AP62906 217 aaKnown RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 SOX4Q06945 474 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 SIX1Q15475 284 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 SOWAHAQ2M3V2 549 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 SV2CQ496J9 727 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 ADGRD2Q7Z7M1 963 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 UNC93AQ86WB7 457 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 RASGRP3Q8IV61 690 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 DCP1BQ8IZD4 617 aaKnown RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 LEMD2Q8NC56 503 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 JOSD2Q8TAC2 188 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 TCP10LQ8TDR4 215 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 GTF3AQ92664 365 aaKnown RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 C19orf60Q96EN9 201 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 PPP1R36Q96LQ0 422 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 SLC6A15Q9H2J7 730 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 TLR9Q9NR96 1032 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 KLHL11Q9NVR0 708 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 DAPK2Q9UIK4 370 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 RUVBL1Q9Y265 456 aaKnown RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 H3BSA7 217 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 GPR182O15218 404 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 NUPL2O15504 423 aaKnown RBP12.48□□□□□ -0.41
DDX55-206ENST00000539934 DYRK3O43781 588 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 GMDSO60547 372 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 KLHL18O94889 574 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 ADH1CP00326 375 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 RALAP11233 206 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 MAP4P27816 1152 aaKnown RBP12.48□□□□□ -0.41
DDX55-206ENST00000539934 FNTBP49356 437 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 TKTL1P51854 596 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 DSC2Q02487 901 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 TOP3AQ13472 1001 aaPredicted RBP12.48□□□□□ -0.41
DDX55-206ENST00000539934 CAPRIN1Q14444 709 aaKnown RBP12.48□□□□□ -0.41
DDX55-206ENST00000539934 TTC27Q6P3X3 843 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 SPOCD1Q6ZMY3 1216 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 SPATC1Q76KD6 591 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 RAB11FIP2Q7L804 512 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 RCOR2Q8IZ40 523 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 PPM1NQ8N819 430 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 MFSD2AQ8NA29 543 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 TBC1D15Q8TC07 691 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 C1orf54Q8WWF1 131 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 ZFP42Q96MM3 310 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 GPR61Q9BZJ8 451 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 KLHL9Q9P2J3 617 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 GVINP1Q7Z2Y8 2422 aa12.48□□□□□ -0.41
DDX55-206ENST00000539934 C2orf74A8MZ97 194 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 H3BM21 787 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PIK3R2O00459 728 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PODXLO00592 558 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 FPGTO14772 594 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 SLC22A2O15244 555 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A9O60656 530 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 HUS1O60921 280 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 DHFRP00374 187 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 CDH1P12830 882 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 TCF4P15884 667 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 GJA1P17302 382 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A6P19224 532 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 HK1P19367 917 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A1P22309 533 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A4P22310 534 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 ECHS1P30084 290 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A3P35503 534 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A5P35504 534 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 HSD17B3P37058 310 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PTGIRP43119 386 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 SLC15A1P46059 708 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 GABRB2P47870 512 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 KCNJ1P48048 391 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 DIO1P49895 249 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 EIF3BP55884 814 aaKnown RBP12.47□□□□□ -0.41
DDX55-206ENST00000539934 SPCS3P61009 180 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 MGAT3Q09327 533 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PRKG2Q13237 762 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 CAMK1Q14012 370 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 TRIM25Q14258 630 aaKnown RBP12.47□□□□□ -0.41
DDX55-206ENST00000539934 MORF4L2Q15014 288 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 HADHQ16836 314 aaKnown RBP12.47□□□□□ -0.41
DDX55-206ENST00000539934 ATP13A4Q4VNC1 1196 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PITRM1Q5JRX3 1037 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 FAM102AQ5T9C2 384 aaPredicted RBP12.47□□□□□ -0.41
DDX55-206ENST00000539934 C5orf46Q6UWT4 87 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 NUP54Q7Z3B4 507 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 EMC1Q8N766 993 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 FNDC5Q8NAU1 212 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 C11orf65Q8NCR3 313 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 OR4D10Q8NGI6 311 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 SEC14L1Q92503 715 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 FBXW5Q969U6 566 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PPP1R2P1Q96PQ5 205 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PKP4Q99569 1192 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 ABCG8Q9H221 673 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 NEUROG2Q9H2A3 272 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms