RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ARHGAP22Q7Z5H3 698 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 SFRP1Q8N474 314 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 CNTD1Q8N815 330 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 AP2M1Q96CW1 435 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 AGAP3Q96P47 875 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 RIOK2Q9BVS4 552 aaKnown RBP14.75□□□□□ -0.05
USB1-203ENST00000539737 CEP41Q9BYV8 373 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 ASPSCR1Q9BZE9 553 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 TUBD1Q9UJT1 453 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 RPL26L1Q9UNX3 145 aaKnown RBP14.75□□□□□ -0.05
USB1-203ENST00000539737 ITPR2Q14571 2701 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 ZNF106Q9H2Y7 1883 aaKnown RBP14.74□□□□□ -0.05
USB1-203ENST00000539737 A1L4Q6 167 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 ACP5P13686 325 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 ZNF30P17039 623 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 CD86P42081 329 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 SEPHS1P49903 392 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 EIF3EP60228 445 aaKnown RBP14.74□□□□□ -0.05
USB1-203ENST00000539737 HHEXQ03014 270 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 NIPAL4Q0D2K0 466 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 KLF1Q13351 362 aaPredicted RBP14.74□□□□□ -0.05
USB1-203ENST00000539737 GALNT6Q8NCL4 622 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 OR10G6Q8NH81 332 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 APOBEC4Q8WW27 367 aaKnown RBP14.74□□□□□ -0.05
USB1-203ENST00000539737 PIH1D2Q8WWB5 315 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 KIAA1143Q96AT1 154 aaPredicted RBP14.74□□□□□ -0.05
USB1-203ENST00000539737 IMP4Q96G21 291 aaKnown RBP14.74□□□□□ -0.05
USB1-203ENST00000539737 TEKT5Q96M29 485 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 SLC25A51Q9H1U9 297 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 GLOD4Q9HC38 313 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 KLHL8Q9P2G9 620 aaPredicted RBP14.74□□□□□ -0.05
USB1-203ENST00000539737 ZNHIT2Q9UHR6 403 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 CROTQ9UKG9 612 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 TRHDEQ9UKU6 1024 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 KCNMB2Q9Y691 235 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 CACNA1DQ01668 2161 aa14.74□□□□□ -0.05
USB1-203ENST00000539737 CREBBPQ92793 2442 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 TEP1Q99973 2627 aaKnown RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 FZD6O60353 706 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 KATNA1O75449 491 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 NTRK1P04629 796 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 RBP3P10745 1247 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 TYRP1P17643 537 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 COL8A1P27658 744 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 MAP4P27816 1152 aaKnown RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 TEAD1P28347 426 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 DLSTP36957 453 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 STAT5AP42229 794 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 RAB15P59190 212 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 PTSQ03393 145 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 FOXM1Q08050 763 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 WASHC5Q12768 1159 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 CHAF1BQ13112 559 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 SQSTM1Q13501 440 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 PLA2G4EQ3MJ16 856 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 ITPRIPL1Q6GPH6 555 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 GALNT13Q8IUC8 556 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 SCARF2Q96GP6 870 aaPredicted RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 CATSPER2Q96P56 530 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 MCCC1Q96RQ3 725 aaPredicted RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 ADGRE3Q9BY15 652 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 TRIM55Q9BYV6 548 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 FRMD8P1Q9BZ68 369 aaPredicted RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 PCDH9Q9HC56 1237 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 LRRC4CQ9HCJ2 640 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 PRDM8Q9NQV8 689 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 SIDT1Q9NXL6 827 aaKnown RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 OGFRQ9NZT2 677 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 SCHIP1Q9P0W5 487 aaPredicted RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 LUZP4Q9P127 313 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 PDP2Q9P2J9 529 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 CNOT6Q9ULM6 557 aaKnown RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 PPIL1Q9Y3C6 166 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 JRKLQ9Y4A0 524 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 TMEM184BQ9Y519 407 aaPredicted RBP14.73□□□□□ -0.05
USB1-203ENST00000539737 RPS6KL1Q9Y6S9 549 aa14.73□□□□□ -0.05
USB1-203ENST00000539737 CDC14CA4D256 554 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 FADS2P1A8MWK0 482 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 KIF1CO43896 1103 aaKnown RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 KIF5CO60282 957 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 DNAJC6O75061 913 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 MMP2P08253 660 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 RBL1P28749 1068 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 TNNT3P45378 269 aaPredicted RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 FASLGP48023 281 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 LEPRP48357 1165 aaKnown RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 GPLD1P80108 840 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 DPTQ07507 201 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 KLRB1Q12918 225 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 CLPPQ16740 277 aaPredicted RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 PRR30Q53SZ7 412 aaPredicted RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 DARS2Q6PI48 645 aaKnown RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 CEACAM20Q6UY09 585 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 ADAMTSL4Q6UY14 1074 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 SLC13A5Q86YT5 568 aaPredicted RBP14.72□□□□□ -0.05
USB1-203ENST00000539737 REXO1L1PQ8IX06 675 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 LPCAT1Q8NF37 534 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 CCHCR1Q8TD31 782 aa14.72□□□□□ -0.05
USB1-203ENST00000539737 WDR24Q96S15 920 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms