RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ANKRD20A3Q5VUR7 823 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 C11orf96Q7Z7L8 435 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TMEM139Q8IV31 216 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 RASGEF1AQ8N9B8 481 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 AVL9Q8NBF6 648 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 CCDC110Q8TBZ0 833 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TTC25Q96NG3 672 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 DESI2Q9BSY9 194 aa18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PACSIN2Q9UNF0 486 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 FASNP49327 2511 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-212ENST00000539372 LILRA5A6NI73 299 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PRR19A6NJB7 356 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 OR52A4PA6NMU1 304 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 STMND1H3BQB6 276 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 GAPDHSO14556 408 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 STX7O15400 261 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 STK10O94804 968 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TJP3O95049 919 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 BRAFP15056 766 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TYRP1P17643 537 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 CETN2P41208 172 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 CTSCP53634 463 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PRPSAP1Q14558 356 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ANKS6Q68DC2 871 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TMEM26Q6ZUK4 368 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ARHGAP22Q7Z5H3 698 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ZNF843Q8N446 348 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 SPC24Q8NBT2 197 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 BRSK1Q8TDC3 778 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 CTRCQ99895 268 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 DDA1Q9BW61 102 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 SEMA4CQ9C0C4 833 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 AMFRQ9UKV5 643 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 KCTD3Q9Y597 815 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PCDHGA3Q9Y5H0 932 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 SLC30A1Q9Y6M5 507 aa18.75■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ATMQ13315 3056 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 OR2AG2A6NM03 316 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 B4E171 279 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 FTCDO95954 541 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 VCLP18206 1134 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 WT1P19544 449 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 IDSP22304 550 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ADRA1AP35348 466 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TSPAN7P41732 249 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 GFERP55789 205 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 CLCA4Q14CN2 919 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 LDLRAP1Q5SW96 308 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 DCAF12Q5T6F0 453 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 GPRC6AQ5T6X5 926 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ABRAXAS1Q6UWZ7 409 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PEX26Q7Z412 305 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 BMPERQ8N8U9 685 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 DDHD1Q8NEL9 900 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 DTX3LQ8TDB6 740 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 SGF29Q96ES7 293 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 WBP1Q96G27 269 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 SPATA13Q96N96 652 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ZCCHC2Q9C0B9 1178 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 EPB41L1Q9H4G0 881 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 UCK1Q9HA47 277 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 OGFRQ9NZT2 677 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 WDR37Q9Y2I8 494 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 AAR2Q9Y312 384 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 BAHCC1Q9P281 2608 aa18.74■□□□□ 0.59
TNFRSF1A-212ENST00000539372 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PPFIA2O75334 1257 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 POP7O75817 140 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 UBXN7O94888 489 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PRAMEF1O95521 474 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PTMAP06454 111 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 LPOP22079 712 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PBLDP30039 288 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ITGA9Q13797 1035 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 SPARCL1Q14515 664 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TAF1AQ15573 450 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 AGAP9Q5VTM2 703 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 TMEM220Q6QAJ8 160 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 RANBP10Q6VN20 620 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 DET1Q7L5Y6 550 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 AMZ2Q86W34 360 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PLXDC1Q8IUK5 500 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 OR4K2Q8NGD2 314 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ZNF398Q8TD17 642 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 NAT14Q8WUY8 206 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 NKD1Q969G9 470 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 CXorf40BQ96DE9 158 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ASPSCR1Q9BZE9 553 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 FKBPLQ9UIM3 349 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 PCDHGA4Q9Y5G9 962 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 SDK2Q58EX2 2172 aa18.73■□□□□ 0.59
TNFRSF1A-212ENST00000539372 C2orf81A6NN90 581 aa18.72■□□□□ 0.59
TNFRSF1A-212ENST00000539372 AMD1P17707 334 aa18.72■□□□□ 0.59
TNFRSF1A-212ENST00000539372 MSH3P20585 1137 aa18.72■□□□□ 0.59
TNFRSF1A-212ENST00000539372 AKT1P31749 480 aa18.72■□□□□ 0.59
TNFRSF1A-212ENST00000539372 ATP1A2P50993 1020 aa18.72■□□□□ 0.59
TNFRSF1A-212ENST00000539372 RAB15P59190 212 aa18.72■□□□□ 0.59
TNFRSF1A-212ENST00000539372 MC2RQ01718 297 aa18.72■□□□□ 0.59
TNFRSF1A-212ENST00000539372 KIF5AQ12840 1032 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms