RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CACNG1Q06432 222 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 SFSWAPQ12872 951 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 ZNF460Q14592 562 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CHI3L2Q15782 390 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 TECRLQ5HYJ1 363 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 AARS2Q5JTZ9 985 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 PSAPL1Q6NUJ1 521 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 BRAT1Q6PJG6 821 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 ZYG11AQ6WRX3 759 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 LDB1Q86U70 411 aaPredicted RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 ZNF513Q8N8E2 541 aaPredicted RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 NRG4Q8WWG1 115 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 GFM2Q969S9 779 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 LRIG1Q96JA1 1093 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 ECSITQ9BQ95 431 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 HEPHQ9BQS7 1158 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 GPR63Q9BZJ6 419 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 ZDHHC6Q9H6R6 413 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 ZFYVE1Q9HBF4 777 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CAPN10Q9HC96 672 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CACNA2D2Q9NY47 1150 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 NFKBIL1Q9UBC1 381 aaPredicted RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 DKK3Q9UBP4 350 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 HEY2Q9UBP5 337 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 ZMIZ1Q9ULJ6 1067 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 DUSP12Q9UNI6 340 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 SORCS3Q9UPU3 1222 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 MED16Q9Y2X0 877 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 A0A0U1RQS6 177 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 TK2O00142 265 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 NPC1O15118 1278 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 H2AFYO75367 372 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 EGFP01133 1207 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 UGT2B4P06133 528 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CTSLP07711 333 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 LTA4HP09960 611 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 CCDC166P0CW27 439 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 ANPEPP15144 967 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 DRD1P21728 446 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 IL12RB1P42701 662 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 KPNA2P52292 529 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 PGGT1BP53609 377 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 SLC12A2P55011 1212 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 GRSF1Q12849 480 aaKnown RBP eCLIP8.76□□□□□ -1.01
DDB1-213ENST00000539332 ENPP2Q13822 863 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 ELAVL3Q14576 367 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 SLC44A4Q53GD3 710 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 SETMARQ53H47 684 aaPredicted RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 C9orf64Q5T6V5 341 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CRTC1Q6UUV9 634 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 TMEM207Q6UWW9 146 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 GDPD4Q6W3E5 623 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CERS6Q6ZMG9 384 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 RAPH1Q70E73 1250 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 USP45Q70EL2 814 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 C10orf107Q8IVU9 208 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CHPFQ8IZ52 775 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 STK40Q8N2I9 435 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 FSTL5Q8N475 847 aaPredicted RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 PNPLA1Q8N8W4 532 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 NXNL1Q96CM4 212 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 MSANTD3Q96H12 275 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 BIRC8Q96P09 236 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 MRPL57Q9BQC6 102 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 SIKE1Q9BRV8 207 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 C20orf27Q9GZN8 174 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 P2RY12Q9H244 342 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 MRPL46Q9H2W6 279 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 ARL8BQ9NVJ2 186 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 THAP1Q9NVV9 213 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 OXSMQ9NWU1 459 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 KCNK4Q9NYG8 393 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 APPL1Q9UKG1 709 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 OAS3Q9Y6K5 1087 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 STON1Q9Y6Q2 735 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 C19orf67A6NJJ6 358 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 MAP3K13O43283 966 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 LEFTY1O75610 366 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 TM7SF2O76062 418 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 CLDN7O95471 211 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 EPHX1P07099 455 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 ZNF37AP17032 561 aaPredicted RBP8.75□□□□□ -1.01
DDB1-213ENST00000539332 ZNF30P17039 623 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 BPIP17213 487 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 LHCGRP22888 699 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 RPS3P23396 243 aaKnown RBP eCLIP8.75□□□□□ -1.015e-8■■■□□ 16.9
DDB1-213ENST00000539332 PMLP29590 882 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 TIE1P35590 1138 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 PTGER3P43115 390 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 CDKN1CP49918 316 aaPredicted RBP8.75□□□□□ -1.01
DDB1-213ENST00000539332 SEC13P55735 322 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 ACTR3P61158 418 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 ASPHQ12797 758 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 STX3Q13277 289 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 NFATC2Q13469 925 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 NUMA1Q14980 2115 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 FAM83EQ2M2I3 478 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 C2orf27AQ580R0 203 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
DDB1-213ENST00000539332 AGAP9Q5VTM2 703 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms