RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 LATS2Q9NRM7 1088 aa20.15■□□□□ 0.82
DDX55-205ENST00000538744 RAD18Q9NS91 495 aa20.15■□□□□ 0.82
DDX55-205ENST00000538744 THG1LQ9NWX6 298 aaKnown RBP20.15■□□□□ 0.82
DDX55-205ENST00000538744 MSRAQ9UJ68 235 aa20.15■□□□□ 0.82
DDX55-205ENST00000538744 PCTPQ9UKL6 214 aa20.15■□□□□ 0.82
DDX55-205ENST00000538744 COPG1Q9Y678 874 aaKnown RBP20.15■□□□□ 0.82
DDX55-205ENST00000538744 IGLV3-16A0A075B6K0 115 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 S100BP04271 92 aaPredicted RBP20.14■□□□□ 0.81
DDX55-205ENST00000538744 AGTR2P50052 363 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 DCDC1P59894 354 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 SLC25A3Q00325 362 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 PDGFRLQ15198 375 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 ZRSR2Q15696 482 aaKnown RBP20.14■□□□□ 0.81
DDX55-205ENST00000538744 TTLL9Q3SXZ7 439 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 SBSNQ6UWP8 590 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 GPR149Q86SP6 731 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 SNX32Q86XE0 403 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 RP9Q8TA86 221 aaKnown RBP20.14■□□□□ 0.81
DDX55-205ENST00000538744 C19orf60Q96EN9 201 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 MARK4Q96L34 752 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 PANX3Q96QZ0 392 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 SEMA4BQ9NPR2 832 aaPredicted RBP20.14■□□□□ 0.81
DDX55-205ENST00000538744 KLHL42Q9P2K6 505 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 DEC1Q9P2X7 70 aa20.14■□□□□ 0.81
DDX55-205ENST00000538744 TSR3Q9UJK0 312 aaKnown RBP20.14■□□□□ 0.81
DDX55-205ENST00000538744 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.14■□□□□ 0.81
DDX55-205ENST00000538744 MUC22E2RYF6 1773 aaPredicted RBP20.14■□□□□ 0.81
DDX55-205ENST00000538744 PPP6CO00743 305 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 PEX11AO75192 247 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 CIB2O75838 187 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 MLYCDO95822 493 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 GM2AP17900 193 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 GAB4Q2WGN9 574 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 ULK2Q8IYT8 1036 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 PPP2R3CQ969Q6 453 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 NXPE3Q969Y0 559 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 FAM83CQ9BQN1 747 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 APOL5Q9BWW9 433 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 SPATA16Q9BXB7 569 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 FAM126AQ9BYI3 521 aaPredicted RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 IGFLR1Q9H665 355 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 KCTD5Q9NXV2 234 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 CD84Q9UIB8 345 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 PRRC2BQ5JSZ5 2229 aaKnown RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 UBDO15205 165 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 RAD51BO15315 384 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 LMNAP02545 664 aaKnown RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 SLC6A11P48066 632 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 CYLC2Q14093 348 aaPredicted RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 EIF4HQ15056 248 aaKnown RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 RAB30Q15771 203 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 ACSBG2Q5FVE4 666 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 DPPA4Q7L190 304 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 HSD11B1LQ7Z5J1 315 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 ZNF366Q8N895 744 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 OR56A4Q8NGH8 313 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 TWIST2Q8WVJ9 160 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 FAM83DQ9H4H8 585 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 CD248Q9HCU0 757 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 SMOXQ9NWM0 555 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 UTP6Q9NYH9 597 aaKnown RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 NFKBIL1Q9UBC1 381 aaPredicted RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 EIF2B4Q9UI10 523 aaKnown RBP20.13■□□□□ 0.81
DDX55-205ENST00000538744 DNAJC15Q9Y5T4 150 aa20.13■□□□□ 0.81
DDX55-205ENST00000538744 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.12■□□□□ 0.81
DDX55-205ENST00000538744 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.12■□□□□ 0.81
DDX55-205ENST00000538744 C16orf96A6NNT2 1141 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 PRRT4C9JH25 899 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 ENTPD5O75356 428 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 GPC4O75487 556 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 CRCPO75575 148 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 OR56A5P0C7T3 313 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 CBSLP0DN79 551 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 ITGAXP20702 1163 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 CBSP35520 551 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 B4GALNT1Q00973 533 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 SQLEQ14534 574 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 KPNB1Q14974 876 aaKnown RBP20.12■□□□□ 0.81
DDX55-205ENST00000538744 FNDC3BQ53EP0 1204 aaKnown RBP20.12■□□□□ 0.81
DDX55-205ENST00000538744 FBXO48Q5FWF7 155 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 C6orf163Q5TEZ5 329 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 CYHR1Q6ZMK1 362 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 DTX3LQ8TDB6 740 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 HGH1Q9BTY7 390 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 RNPEPL1Q9HAU8 725 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 OARD1Q9Y530 152 aa20.12■□□□□ 0.81
DDX55-205ENST00000538744 TNPO3Q9Y5L0 923 aaKnown RBP20.12■□□□□ 0.81
DDX55-205ENST00000538744 ANKRD12Q6UB98 2062 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 COL4A3Q01955 1670 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 OTOL1A6NHN0 477 aaPredicted RBP20.11■□□□□ 0.81
DDX55-205ENST00000538744 EPOPA6NHQ4 379 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 PRNPP04156 253 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 FCARP24071 287 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 RBBP7Q16576 425 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 PPP1R3AQ16821 1122 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 LARP4Q71RC2 724 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDX55-205ENST00000538744 EFL1Q7Z2Z2 1120 aaKnown RBP20.11■□□□□ 0.81
DDX55-205ENST00000538744 NET1Q7Z628 596 aaPredicted RBP20.11■□□□□ 0.81
DDX55-205ENST00000538744 PDPRQ8NCN5 879 aa20.11■□□□□ 0.81
DDX55-205ENST00000538744 CLPTM1LQ96KA5 538 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms